RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLIT3O75094 1523 aa22.9■■□□□ 1.26
PDLIM3-212ENST00000620787 ERBB3P21860 1342 aa22.9■■□□□ 1.26
PDLIM3-212ENST00000620787 SLC39A6Q13433 755 aa22.89■■□□□ 1.26
PDLIM3-212ENST00000620787 NBPF11Q86T75 865 aa22.89■■□□□ 1.26
PDLIM3-212ENST00000620787 ERCC4Q92889 916 aaPredicted RBP22.89■■□□□ 1.26
PDLIM3-212ENST00000620787 CCT2P78371 535 aaKnown RBP22.89■■□□□ 1.25
PDLIM3-212ENST00000620787 RABL6Q3YEC7 729 aaPredicted RBP22.89■■□□□ 1.25
PDLIM3-212ENST00000620787 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
PDLIM3-212ENST00000620787 KBTBD3Q8NAB2 608 aa22.89■■□□□ 1.25
PDLIM3-212ENST00000620787 ARFGEF2Q9Y6D5 1785 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 ME1P48163 572 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 FMR1NBQ8N0W7 255 aaPredicted RBP22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 ERO1AQ96HE7 468 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 OSBPL5Q9H0X9 879 aaPredicted RBP22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 NCOA5Q9HCD5 579 aaKnown RBP22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 V9GYY5 206 aaPredicted RBP22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 PALLDQ8WX93 1383 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 FER1L4A9Z1Z3 1794 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 RGPD5Q99666 1765 aa22.88■■□□□ 1.25
PDLIM3-212ENST00000620787 GCP02774 474 aa22.87■■□□□ 1.25
PDLIM3-212ENST00000620787 GSDMDP57764 484 aa22.87■■□□□ 1.25
PDLIM3-212ENST00000620787 GUCY1B3Q02153 619 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 PCDHA7Q9UN72 937 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 SLFN14P0C7P3 912 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 SLFNL1Q499Z3 407 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 ZNF771Q7L3S4 317 aaPredicted RBP22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 MRPS27Q92552 414 aaKnown RBP22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 DSCC1Q9BVC3 393 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 NAT10Q9H0A0 1025 aaKnown RBP22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 FAM53CQ9NYF3 392 aa22.86■■□□□ 1.25
PDLIM3-212ENST00000620787 A0A0G2JLW4 131 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 UBE3BQ7Z3V4 1068 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 CARMIL3Q8ND23 1372 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 ELF2Q15723 593 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 FBXO38Q6PIJ6 1188 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 ANKRD13DQ6ZTN6 518 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 FBXW7Q969H0 707 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 HELLSQ9NRZ9 838 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 IMPACTQ9P2X3 320 aa22.85■■□□□ 1.25
PDLIM3-212ENST00000620787 KIF2AO00139 706 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 PPFIA3O75145 1194 aa22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 SLU7O95391 586 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 PDIA3P30101 505 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 KDM6AO15550 1401 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 E7EWF7 191 aa22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 KRT222Q8N1A0 295 aa22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 RBM33Q96EV2 1170 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 RTEL1Q9NZ71 1219 aa22.84■■□□□ 1.25
PDLIM3-212ENST00000620787 NEDD4P46934 1319 aa22.83■■□□□ 1.25
PDLIM3-212ENST00000620787 ADALQ6DHV7 355 aa22.83■■□□□ 1.25
PDLIM3-212ENST00000620787 ZNF274Q96GC6 653 aaPredicted RBP22.83■■□□□ 1.25
PDLIM3-212ENST00000620787 AXIN2Q9Y2T1 843 aa22.83■■□□□ 1.25
PDLIM3-212ENST00000620787 A0A1B0GVL5 298 aa22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 A0A1W2PQ27 194 aa22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 A0A1W2PQ64 194 aa22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 A0A1W2PQD8 194 aa22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 FDPSP14324 419 aaKnown RBP22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 E4F1Q66K89 784 aaPredicted RBP22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 SLC52A2Q9HAB3 445 aa22.83■■□□□ 1.24
PDLIM3-212ENST00000620787 NDUFA8P51970 172 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 BPIFA3Q9BQP9 254 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 GOLIM4O00461 696 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 DPCR1Q3MIW9 517 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 ZMYM1Q5SVZ6 1142 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 SDF4Q9BRK5 362 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 PAG1Q9NWQ8 432 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 KIAA1468Q9P260 1216 aa22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 NAP1L2Q9ULW6 460 aaPredicted RBP22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
PDLIM3-212ENST00000620787 HSPD1P10809 573 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 CASP7P55210 303 aa22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 ARMCX5Q6P1M9 558 aa22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 XPO4Q9C0E2 1151 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 L2HGDHQ9H9P8 463 aa22.81■■□□□ 1.24
PDLIM3-212ENST00000620787 CHST3Q7LGC8 479 aa22.8■■□□□ 1.24
PDLIM3-212ENST00000620787 LINC00301Q8NCQ3 95 aa22.8■■□□□ 1.24
PDLIM3-212ENST00000620787 CCDC150Q8NCX0 1101 aa22.8■■□□□ 1.24
PDLIM3-212ENST00000620787 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
PDLIM3-212ENST00000620787 PPP1R13BQ96KQ4 1090 aa22.8■■□□□ 1.24
PDLIM3-212ENST00000620787 TERF2Q15554 542 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 NWD2Q9ULI1 1742 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 A0A087WZG4 1122 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 IFNKQ9P0W0 207 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 CLIC4Q9Y696 253 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 MAST3O60307 1309 aa22.79■■□□□ 1.24
PDLIM3-212ENST00000620787 ATP5J2-PTCD1G3V325 749 aa22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 PTCD1O75127 700 aaKnown RBP22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 TMC6Q7Z403 805 aa22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 NFATC2IPQ8NCF5 419 aa22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 ZNF446Q9NWS9 450 aa22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 DDX60Q8IY21 1712 aaKnown RBP22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 SPEF2Q9C093 1822 aa22.78■■□□□ 1.24
PDLIM3-212ENST00000620787 SMC2O95347 1197 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 KCNJ6P48051 423 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 LMBR1LQ6UX01 489 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms