RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FGFR2P21802 821 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 KCNA3P22001 575 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 UBE4AQ14139 1066 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 PUM3Q15397 648 aaKnown RBP9.84□□□□□ -0.83
CPNE3-209ENST00000620393 ATP2B3Q16720 1220 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 LPIN2Q92539 896 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 ATP6V0A2Q9Y487 856 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 PPEF1O14829 653 aaPredicted RBP9.83□□□□□ -0.84
CPNE3-209ENST00000620393 MX1P20591 662 aa9.83□□□□□ -0.84
CPNE3-209ENST00000620393 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
CPNE3-209ENST00000620393 XAGE2Q96GT9 111 aa9.83□□□□□ -0.84
CPNE3-209ENST00000620393 DBNDD2Q9BQY9 259 aa9.83□□□□□ -0.84
CPNE3-209ENST00000620393 DBNLQ9UJU6 430 aaKnown RBP9.83□□□□□ -0.84
CPNE3-209ENST00000620393 LEMD3Q9Y2U8 911 aa9.83□□□□□ -0.84
CPNE3-209ENST00000620393 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 SNAP23O00161 211 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 ERC2O15083 957 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 GLRX3O76003 335 aaKnown RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 IFIT1P09914 478 aaKnown RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 SLC5A1P13866 664 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 ATP5JP18859 108 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 ATP2B4P23634 1241 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 C7orf43Q8WVR3 580 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 GPATCH3Q96I76 525 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 PODXL2Q9NZ53 605 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 PIM2Q9P1W9 311 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 NSFL1CQ9UNZ2 370 aaKnown RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
CPNE3-209ENST00000620393 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 AOX1Q06278 1338 aa9.82□□□□□ -0.84
CPNE3-209ENST00000620393 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-209ENST00000620393 MAP3K13O43283 966 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 ADORA1P30542 326 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 GPSM2P81274 684 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 CCDC158Q5M9N0 1113 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 GORABQ5T7V8 394 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 TTC22Q5TAA0 569 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
CPNE3-209ENST00000620393 PI4K2BQ8TCG2 481 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 PPP1R1BQ9UD71 204 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-209ENST00000620393 ZNF804BA4D1E1 1349 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 XDHP47989 1333 aa9.81□□□□□ -0.84
CPNE3-209ENST00000620393 KCNJ4P48050 445 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 DCAF8Q5TAQ9 597 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 TSHZ3Q63HK5 1081 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 C15orf52Q6ZUT6 534 aaKnown RBP9.8□□□□□ -0.84
CPNE3-209ENST00000620393 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 MPNDQ8N594 471 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPNE3-209ENST00000620393 ZNF512BQ96KM6 892 aaPredicted RBP9.8□□□□□ -0.84
CPNE3-209ENST00000620393 FAM84BQ96KN1 310 aaPredicted RBP9.8□□□□□ -0.84
CPNE3-209ENST00000620393 GGA1Q9UJY5 639 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 CASZ1Q86V15 1759 aa9.8□□□□□ -0.84
CPNE3-209ENST00000620393 UQCRFS1P1P0C7P4 283 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
CPNE3-209ENST00000620393 BCAMP50895 628 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 DALRD3Q5D0E6 543 aaKnown RBP9.79□□□□□ -0.84
CPNE3-209ENST00000620393 TTC39AQ5SRH9 613 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 CCDC102BQ68D86 513 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 SLC51AQ86UW1 340 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
CPNE3-209ENST00000620393 TBC1D16Q8TBP0 767 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 POLLQ9UGP5 575 aa9.79□□□□□ -0.84
CPNE3-209ENST00000620393 COL4A1P02462 1669 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
CPNE3-209ENST00000620393 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 C21orf2O43822 256 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 UFL1O94874 794 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 HIBADHP31937 336 aaKnown RBP9.78□□□□□ -0.84
CPNE3-209ENST00000620393 PHKA1P46020 1223 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 GYG1P46976 350 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 OLFM4Q6UX06 510 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 DPP8Q6V1X1 898 aaPredicted RBP9.78□□□□□ -0.84
CPNE3-209ENST00000620393 HAUS7Q99871 368 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 GNL3LQ9NVN8 582 aaKnown RBP9.78□□□□□ -0.84
CPNE3-209ENST00000620393 ZNF609O15014 1411 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 IRS2Q9Y4H2 1338 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 LAMB2P55268 1798 aa9.78□□□□□ -0.84
CPNE3-209ENST00000620393 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 SDSP20132 328 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 ARID4AP29374 1257 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-209ENST00000620393 SOGA3Q5TF21 947 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-209ENST00000620393 TXNRD3Q86VQ6 643 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 NLGN2Q8NFZ4 835 aa9.77□□□□□ -0.85
CPNE3-209ENST00000620393 RTFDC1Q9BY42 306 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-209ENST00000620393 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
CPNE3-209ENST00000620393 LRP5O75197 1615 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms