RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PITPNM2Q9BZ72 1349 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
UPF3B-204ENST00000619445 VAMP4O75379 141 aa15.17■□□□□ 0.02
UPF3B-204ENST00000619445 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
UPF3B-204ENST00000619445 GGA3Q9NZ52 723 aa15.17■□□□□ 0.02
UPF3B-204ENST00000619445 CSF1RP07333 972 aa15.16■□□□□ 0.02
UPF3B-204ENST00000619445 ITGA6P23229 1130 aa15.16■□□□□ 0.02
UPF3B-204ENST00000619445 FKBP1BP68106 108 aa15.16■□□□□ 0.02
UPF3B-204ENST00000619445 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
UPF3B-204ENST00000619445 GMLQ99445 158 aa15.16■□□□□ 0.02
UPF3B-204ENST00000619445 EGFRP00533 1210 aa15.15■□□□□ 0.02
UPF3B-204ENST00000619445 RGMBQ6NW40 437 aa15.15■□□□□ 0.02
UPF3B-204ENST00000619445 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
UPF3B-204ENST00000619445 MYOZ2Q9NPC6 264 aa15.15■□□□□ 0.02
UPF3B-204ENST00000619445 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
UPF3B-204ENST00000619445 AOC2O75106 756 aa15.14■□□□□ 0.01
UPF3B-204ENST00000619445 KCNJ4P48050 445 aa15.14■□□□□ 0.01
UPF3B-204ENST00000619445 EXOSC9Q06265 439 aaKnown RBP15.14■□□□□ 0.01
UPF3B-204ENST00000619445 SCARF1Q14162 830 aa15.14■□□□□ 0.01
UPF3B-204ENST00000619445 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
UPF3B-204ENST00000619445 CASP7P55210 303 aa15.13■□□□□ 0.01
UPF3B-204ENST00000619445 IFIT5Q13325 482 aaKnown RBP15.13■□□□□ 0.01
UPF3B-204ENST00000619445 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
UPF3B-204ENST00000619445 ADM5C9JUS6 153 aa15.12■□□□□ 0.01
UPF3B-204ENST00000619445 DACT2Q5SW24 774 aa15.12■□□□□ 0.01
UPF3B-204ENST00000619445 ANGEL2Q5VTE6 544 aaKnown RBP15.12■□□□□ 0.01
UPF3B-204ENST00000619445 CDCA5Q96FF9 252 aa15.12■□□□□ 0.01
UPF3B-204ENST00000619445 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
UPF3B-204ENST00000619445 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
UPF3B-204ENST00000619445 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
UPF3B-204ENST00000619445 ZNF157P51786 506 aaPredicted RBP15.11■□□□□ 0.01
UPF3B-204ENST00000619445 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 PAPPA2Q9BXP8 1791 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 ALDH1L1O75891 902 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 NF2P35240 595 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 CCDC57Q2TAC2 916 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
UPF3B-204ENST00000619445 C15orf52Q6ZUT6 534 aaKnown RBP15.11■□□□□ 0.01
UPF3B-204ENST00000619445 GRM8O00222 908 aa15.1■□□□□ 0.01
UPF3B-204ENST00000619445 CHRNDQ07001 517 aa15.1■□□□□ 0.01
UPF3B-204ENST00000619445 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
UPF3B-204ENST00000619445 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
UPF3B-204ENST00000619445 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
UPF3B-204ENST00000619445 C9orf78Q9NZ63 289 aaPredicted RBP15.1■□□□□ 0.01
UPF3B-204ENST00000619445 SLC10A3P09131 477 aa15.09■□□□□ 0.01
UPF3B-204ENST00000619445 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
UPF3B-204ENST00000619445 ZNF804AQ7Z570 1209 aa15.09■□□□□ 0.01
UPF3B-204ENST00000619445 APOBEC3FQ8IUX4 373 aaKnown RBP15.09■□□□□ 0.01
UPF3B-204ENST00000619445 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
UPF3B-204ENST00000619445 CHMP3Q9Y3E7 222 aa15.09■□□□□ 0.01
UPF3B-204ENST00000619445 CASP8AP2Q9UKL3 1982 aa15.08■□□□□ 0
UPF3B-204ENST00000619445 FAM155AB1AL88 458 aaPredicted RBP15.08■□□□□ 0
UPF3B-204ENST00000619445 WNT10BO00744 389 aa15.08■□□□□ 0
UPF3B-204ENST00000619445 FOXO4P98177 505 aa15.08■□□□□ 0
UPF3B-204ENST00000619445 ZNF646O15015 1829 aaPredicted RBP15.07■□□□□ 0
UPF3B-204ENST00000619445 ASTN2O75129 1339 aaPredicted RBP15.07■□□□□ 0
UPF3B-204ENST00000619445 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
UPF3B-204ENST00000619445 F6X3S4 739 aa15.07■□□□□ 0
UPF3B-204ENST00000619445 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
UPF3B-204ENST00000619445 LMBR1LQ6UX01 489 aa15.07■□□□□ 0
UPF3B-204ENST00000619445 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
UPF3B-204ENST00000619445 CD209Q9NNX6 404 aa15.07■□□□□ 0
UPF3B-204ENST00000619445 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
UPF3B-204ENST00000619445 GTF2IP78347 998 aa15.06■□□□□ 0
UPF3B-204ENST00000619445 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
UPF3B-204ENST00000619445 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
UPF3B-204ENST00000619445 DLK2Q6UY11 383 aa15.06■□□□□ 0
UPF3B-204ENST00000619445 LDHAL6AQ6ZMR3 332 aa15.06■□□□□ 0
UPF3B-204ENST00000619445 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
UPF3B-204ENST00000619445 CNNM1Q9NRU3 951 aa15.06■□□□□ 0
UPF3B-204ENST00000619445 MYO1BO43795 1136 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 IL1R1P14778 569 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 SLC4A10Q6U841 1118 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 MTMR14Q8NCE2 650 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 TSKSQ9UJT2 592 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 A0A1B0GUL6 1792 aa15.05■□□□□ -0
UPF3B-204ENST00000619445 PTPRCP08575 1304 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 ZNF521Q96K83 1311 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 E9PSI1 815 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 DLGAP5Q15398 846 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 RASAL3Q86YV0 1011 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 KIAA0825Q8IV33 1275 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 PPP2R3BQ9Y5P8 575 aa15.04■□□□□ -0
UPF3B-204ENST00000619445 TAF5LO75529 589 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 KLRK1P26718 216 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 UBE4AQ14139 1066 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 TTLL12Q14166 644 aaPredicted RBP15.03■□□□□ -0
UPF3B-204ENST00000619445 ARMC9Q7Z3E5 817 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 ZIC5Q96T25 663 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 ECM29Q5VYK3 1845 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 UTYO14607 1347 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 IRS2Q9Y4H2 1338 aa15.03■□□□□ -0
UPF3B-204ENST00000619445 UNCXA6NJT0 531 aa15.02■□□□□ -0
UPF3B-204ENST00000619445 ZBED3Q96IU2 234 aaPredicted RBP15.02■□□□□ -0
UPF3B-204ENST00000619445 CSRNP1Q96S65 589 aa15.02■□□□□ -0
UPF3B-204ENST00000619445 MXD3Q9BW11 206 aa15.02■□□□□ -0
UPF3B-204ENST00000619445 RNF186Q9NXI6 227 aa15.02■□□□□ -0
UPF3B-204ENST00000619445 TRPA1O75762 1119 aa15.01□□□□□ -0.01
UPF3B-204ENST00000619445 SASH1O94885 1247 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms