RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 OSBPL3Q9H4L5 887 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 KCPQ6ZWJ8 1503 aa8.25□□□□□ -1.09
SRGAP3-213ENST00000618999 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 CCNL1Q9UK58 526 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 NUBP1P53384 320 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 ZRSR1Q15695 479 aaKnown RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 AACSQ86V21 672 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 FAM177A1Q8N128 213 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 H7C1W4 665 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 KDM4AO75164 1064 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 KRT85P78386 507 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 MTX1Q13505 466 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 GIMAP6Q6P9H5 292 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 ZNF771Q7L3S4 317 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 PALD1Q9ULE6 856 aa8.24□□□□□ -1.09
SRGAP3-213ENST00000618999 DPYSL4O14531 572 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 NPHP1O15259 732 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CASTP20810 708 aaKnown RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 FGD1P98174 961 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC57Q2TAC2 916 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 TRIM5Q9C035 493 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 UTYO14607 1347 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 GOLGA6L19H0YKK7 550 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 PDCP20941 246 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 EIF5P55010 431 aaKnown RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 INTS5Q6P9B9 1019 aaKnown RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CWC27Q6UX04 472 aaKnown RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC83Q8IWF9 413 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 ZSCAN31Q96LW9 406 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CCDC8Q9H0W5 538 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 NUP62CLQ9H1M0 184 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 CYP46A1Q9Y6A2 500 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 F13A1P00488 732 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 MAP3K11Q16584 847 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 SMIM5Q71RC9 77 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 KRT27Q7Z3Y8 459 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 C17orf53Q8N3J3 647 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 BICD2Q8TD16 824 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 PDRG1Q9NUG6 133 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 C5P01031 1676 aa8.23□□□□□ -1.09
SRGAP3-213ENST00000618999 GNPATO15228 680 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ZNF772Q68DY9 489 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 SYNE4Q8N205 404 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 JAKMIP1Q96N16 626 aaKnown RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 NIP7Q9Y221 180 aaKnown RBP eCLIP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 NRDCO43847 1150 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 TRIM37O94972 964 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 NLRP10Q86W26 655 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 NEUROD6Q96NK8 337 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 TNMDQ9H2S6 317 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ZNF652Q9Y2D9 606 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 TSC1Q92574 1164 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 NWD2Q9ULI1 1742 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ERVV-1B6SEH8 477 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 IRS4O14654 1257 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 SYT1P21579 422 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 GJB2P29033 226 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 MCM6Q14566 821 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 FAM196AQ6ZSG2 479 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 LINC00116Q8NCU8 138 aa8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-213ENST00000618999 ZPR1O75312 459 aa8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 AK2P54819 239 aa8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 IFIT5Q13325 482 aaKnown RBP8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 TPD52L1Q16890 204 aaPredicted RBP8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 RNF20Q5VTR2 975 aa8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 GTPBP4Q9BZE4 634 aaKnown RBP8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 NRAPQ86VF7 1730 aa8.21□□□□□ -1.09
SRGAP3-213ENST00000618999 SHANK3Q9BYB0 1731 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 TOGARAM1Q9Y4F4 1720 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 EPB41L2O43491 1005 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 PSMA5P28066 241 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 RBM6P78332 1123 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC112Q8NEF3 446 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 SERPINA10Q9UK55 444 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 BECN2A8MW95 431 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 SASH1O94885 1247 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 HSPA4P34932 840 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 CASP7P55210 303 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 DNM1Q05193 864 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 COPRSQ9NQ92 184 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 IVNS1ABPQ9Y6Y0 642 aa8.21□□□□□ -1.1
SRGAP3-213ENST00000618999 H3BQV1 296 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms