RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 EYA2O00167 538 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 PSMD14O00487 310 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 ZBTB22O15209 634 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 TAF5LO75529 589 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 RAD17O75943 681 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 GNAI2P04899 355 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 IL1R1P14778 569 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 FGFR2P21802 821 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 RPS12P25398 132 aaKnown RBP10.33□□□□□ -0.76
NEK3-209ENST00000618856 EPHX2P34913 555 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 UBE4AQ14139 1066 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
NEK3-209ENST00000618856 KLHDC4Q8TBB5 520 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 CNNM1Q9NRU3 951 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 PGAP2Q9UHJ9 254 aa10.33□□□□□ -0.76
NEK3-209ENST00000618856 SNAP23O00161 211 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 PDE8BO95263 885 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 MS4A1P11836 297 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 EPS15P42566 896 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 GMPSP49915 693 aaPredicted RBP10.32□□□□□ -0.76
NEK3-209ENST00000618856 TAF7LQ5H9L4 462 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 DACT2Q5SW24 774 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
NEK3-209ENST00000618856 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
NEK3-209ENST00000618856 GJA3Q9Y6H8 435 aa10.32□□□□□ -0.76
NEK3-209ENST00000618856 ZNF280AP59817 542 aaPredicted RBP10.31□□□□□ -0.76
NEK3-209ENST00000618856 POLA2Q14181 598 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 STRIP1Q5VSL9 837 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
NEK3-209ENST00000618856 FTSJ3Q8IY81 847 aaKnown RBP10.31□□□□□ -0.76
NEK3-209ENST00000618856 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
NEK3-209ENST00000618856 AGBL3Q8NEM8 1001 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 CD209Q9NNX6 404 aa10.31□□□□□ -0.76
NEK3-209ENST00000618856 ADARB2Q9NS39 739 aaKnown RBP10.31□□□□□ -0.76
NEK3-209ENST00000618856 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 ITGBL1O95965 494 aaPredicted RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 HSPA6P17066 643 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 IL15P40933 162 aaPredicted RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 MMP14P50281 582 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 FKBP1AP62942 108 aaKnown RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 ATP8B2P98198 1209 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 MVPQ14764 893 aaKnown RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 SSH3Q8TE77 659 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 FAM84BQ96KN1 310 aaPredicted RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 CNOT7Q9UIV1 285 aaKnown RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
NEK3-209ENST00000618856 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 PASKQ96RG2 1323 aa10.3□□□□□ -0.76
NEK3-209ENST00000618856 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
NEK3-209ENST00000618856 KCNJ4P48050 445 aa10.29□□□□□ -0.76
NEK3-209ENST00000618856 PUM3Q15397 648 aaKnown RBP10.29□□□□□ -0.76
NEK3-209ENST00000618856 METTL24Q5JXM2 366 aa10.29□□□□□ -0.76
NEK3-209ENST00000618856 TDRD7Q8NHU6 1098 aaKnown RBP10.29□□□□□ -0.76
NEK3-209ENST00000618856 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
NEK3-209ENST00000618856 ZBTB40Q9NUA8 1239 aa10.29□□□□□ -0.76
NEK3-209ENST00000618856 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
NEK3-209ENST00000618856 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 PLIN1O60240 522 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 SASH1O94885 1247 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 EGFRP00533 1210 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 ZNF804AQ7Z570 1209 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 LPIN2Q92539 896 aa10.28□□□□□ -0.76
NEK3-209ENST00000618856 PA2G4Q9UQ80 394 aaKnown RBP10.28□□□□□ -0.76
NEK3-209ENST00000618856 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
NEK3-209ENST00000618856 ARAP2Q8WZ64 1704 aa10.27□□□□□ -0.76
NEK3-209ENST00000618856 G3V3G9 751 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 H7C1D1 291 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 HIBADHP31937 336 aaKnown RBP10.27□□□□□ -0.77
NEK3-209ENST00000618856 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 C20orf194Q5TEA3 1177 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 TTLL5Q6EMB2 1281 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 CEP85Q6P2H3 762 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 CERS5Q8N5B7 392 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 TRPM4Q8TD43 1214 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.77
NEK3-209ENST00000618856 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 GYG1P46976 350 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 APLP1P51693 650 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 GTF2IP78347 998 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.26□□□□□ -0.77
NEK3-209ENST00000618856 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
NEK3-209ENST00000618856 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 SIL1Q9H173 461 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms