RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 IGHMBP2P38935 993 aaKnown RBP30.31■■■□□ 2.44
VEGFC-202ENST00000618562 ZNF445P59923 1031 aa30.31■■■□□ 2.44
VEGFC-202ENST00000618562 NECTIN1Q15223 517 aa30.31■■■□□ 2.44
VEGFC-202ENST00000618562 TICAM2Q86XR7 235 aa30.31■■■□□ 2.44
VEGFC-202ENST00000618562 GTF2E1P29083 439 aaPredicted RBP30.31■■■□□ 2.44
VEGFC-202ENST00000618562 FKBP4Q02790 459 aaKnown RBP eCLIP30.31■■■□□ 2.44
VEGFC-202ENST00000618562 NBPF5PQ86XG9 351 aaPredicted RBP30.31■■■□□ 2.44
VEGFC-202ENST00000618562 KCNB2Q92953 911 aa30.31■■■□□ 2.44
VEGFC-202ENST00000618562 RBM8AQ9Y5S9 174 aaKnown RBP30.31■■■□□ 2.44
VEGFC-202ENST00000618562 PRPF40BQ6NWY9 871 aaKnown RBP30.3■■■□□ 2.44
VEGFC-202ENST00000618562 SEC62Q99442 399 aaKnown RBP30.3■■■□□ 2.44
VEGFC-202ENST00000618562 LPIN2Q92539 896 aa30.29■■■□□ 2.44
VEGFC-202ENST00000618562 TAF5LO75529 589 aa30.29■■■□□ 2.44
VEGFC-202ENST00000618562 ADRA2BP18089 450 aa30.29■■■□□ 2.44
VEGFC-202ENST00000618562 MCMDC2Q4G0Z9 681 aa30.28■■■□□ 2.44
VEGFC-202ENST00000618562 ZNF512BQ96KM6 892 aaPredicted RBP30.28■■■□□ 2.44
VEGFC-202ENST00000618562 CDC5LQ99459 802 aaKnown RBP30.28■■■□□ 2.44
VEGFC-202ENST00000618562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.27■■■□□ 2.44
VEGFC-202ENST00000618562 PRPF40AO75400 957 aaKnown RBP30.27■■■□□ 2.44
VEGFC-202ENST00000618562 SLFNL1Q499Z3 407 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 PI16Q6UXB8 463 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 TTC14Q96N46 770 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 MCAMP43121 646 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 ZAP70P43403 619 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 CCDC129Q6ZRS4 1044 aa30.27■■■□□ 2.44
VEGFC-202ENST00000618562 NOL8Q76FK4 1167 aaKnown RBP30.26■■■□□ 2.43
VEGFC-202ENST00000618562 A0A1B0GUL6 1792 aa30.26■■■□□ 2.43
VEGFC-202ENST00000618562 SNAP23O00161 211 aa30.26■■■□□ 2.43
VEGFC-202ENST00000618562 CAVIN1Q6NZI2 390 aaKnown RBP30.26■■■□□ 2.43
VEGFC-202ENST00000618562 TPTE2Q6XPS3 522 aa30.26■■■□□ 2.43
VEGFC-202ENST00000618562 PHKA1P46020 1223 aa30.25■■■□□ 2.43
VEGFC-202ENST00000618562 ZMYM1Q5SVZ6 1142 aa30.25■■■□□ 2.43
VEGFC-202ENST00000618562 CREB3L3Q68CJ9 461 aa30.25■■■□□ 2.43
VEGFC-202ENST00000618562 CCDC102BQ68D86 513 aa30.25■■■□□ 2.43
VEGFC-202ENST00000618562 KCNJ4P48050 445 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 ZSCAN23Q3MJ62 389 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 PROM2Q8N271 834 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 HELLSQ9NRZ9 838 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 MYH7P12883 1935 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 RNF113AO15541 343 aaKnown RBP30.24■■■□□ 2.43
VEGFC-202ENST00000618562 SLC5A1P13866 664 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 CHRNDQ07001 517 aa30.24■■■□□ 2.43
VEGFC-202ENST00000618562 NCLP19338 710 aaKnown RBP30.23■■■□□ 2.43
VEGFC-202ENST00000618562 ARID4AP29374 1257 aaPredicted RBP30.23■■■□□ 2.43
VEGFC-202ENST00000618562 ANKRD18AQ8IVF6 992 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 CCDC24Q8N4L8 307 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 SLC27A2O14975 620 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 NFIXQ14938 502 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 TXNRD1Q16881 649 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 ADCK5Q3MIX3 580 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 GPT2Q8TD30 523 aa30.23■■■□□ 2.43
VEGFC-202ENST00000618562 RRAGDQ9NQL2 400 aaPredicted RBP30.23■■■□□ 2.43
VEGFC-202ENST00000618562 CARMIL3Q8ND23 1372 aa30.22■■■□□ 2.43
VEGFC-202ENST00000618562 MBD3O95983 291 aa30.22■■■□□ 2.43
VEGFC-202ENST00000618562 NLRP3Q96P20 1036 aa30.22■■■□□ 2.43
VEGFC-202ENST00000618562 WDR33Q9C0J8 1336 aaKnown RBP30.21■■■□□ 2.43
VEGFC-202ENST00000618562 TNRC6CQ9HCJ0 1690 aaKnown RBP30.21■■■□□ 2.43
VEGFC-202ENST00000618562 ZKSCAN1P17029 563 aaPredicted RBP30.21■■■□□ 2.43
VEGFC-202ENST00000618562 CELF1Q92879 486 aaKnown RBP30.2■■■□□ 2.43
VEGFC-202ENST00000618562 TM6SF1Q9BZW5 370 aa30.2■■■□□ 2.43
VEGFC-202ENST00000618562 BSDC1Q9NW68 430 aaPredicted RBP30.2■■■□□ 2.43
VEGFC-202ENST00000618562 LIMCH1Q9UPQ0 1083 aa30.2■■■□□ 2.43
VEGFC-202ENST00000618562 MYO5AQ9Y4I1 1855 aaKnown RBP30.2■■■□□ 2.42
VEGFC-202ENST00000618562 UQCRFS1P1P0C7P4 283 aa30.19■■■□□ 2.42
VEGFC-202ENST00000618562 CASTP20810 708 aaKnown RBP30.19■■■□□ 2.42
VEGFC-202ENST00000618562 MAST3O60307 1309 aa30.19■■■□□ 2.42
VEGFC-202ENST00000618562 NASPP49321 788 aaPredicted RBP30.19■■■□□ 2.42
VEGFC-202ENST00000618562 AK2P54819 239 aa30.19■■■□□ 2.42
VEGFC-202ENST00000618562 JAKMIP1Q96N16 626 aaKnown RBP30.19■■■□□ 2.42
VEGFC-202ENST00000618562 RXRBP28702 533 aa30.18■■■□□ 2.42
VEGFC-202ENST00000618562 GYS1P13807 737 aa30.18■■■□□ 2.42
VEGFC-202ENST00000618562 CPA1P15085 419 aa30.18■■■□□ 2.42
VEGFC-202ENST00000618562 LRRFIP1Q32MZ4 808 aaKnown RBP30.18■■■□□ 2.42
VEGFC-202ENST00000618562 RNF20Q5VTR2 975 aa30.18■■■□□ 2.42
VEGFC-202ENST00000618562 ZFYP08048 801 aaPredicted RBP30.17■■■□□ 2.42
VEGFC-202ENST00000618562 FOXD4L5Q5VV16 416 aaPredicted RBP30.17■■■□□ 2.42
VEGFC-202ENST00000618562 FOXD4L4Q8WXT5 416 aaPredicted RBP30.17■■■□□ 2.42
VEGFC-202ENST00000618562 OSBP2Q969R2 916 aa30.17■■■□□ 2.42
VEGFC-202ENST00000618562 ZSWIM6Q9HCJ5 1215 aa30.17■■■□□ 2.42
VEGFC-202ENST00000618562 TAF6LQ9Y6J9 622 aa30.17■■■□□ 2.42
VEGFC-202ENST00000618562 RPAP1Q9BWH6 1393 aaPredicted RBP30.17■■■□□ 2.42
VEGFC-202ENST00000618562 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.16■■■□□ 2.42
VEGFC-202ENST00000618562 M0R2C6 588 aa30.16■■■□□ 2.42
VEGFC-202ENST00000618562 CCDC173Q0VFZ6 552 aa30.16■■■□□ 2.42
VEGFC-202ENST00000618562 RUFY3Q7L099 469 aa30.16■■■□□ 2.42
VEGFC-202ENST00000618562 HMG20BQ9P0W2 317 aa30.16■■■□□ 2.42
VEGFC-202ENST00000618562 VPS53Q5VIR6 699 aa30.15■■■□□ 2.42
VEGFC-202ENST00000618562 MINPP1Q9UNW1 487 aa30.15■■■□□ 2.42
VEGFC-202ENST00000618562 U3KPZ7 1027 aaPredicted RBP30.15■■■□□ 2.42
VEGFC-202ENST00000618562 TSGA10IPQ3SY00 556 aa30.15■■■□□ 2.42
VEGFC-202ENST00000618562 PIH1D3Q9NQM4 214 aaKnown RBP30.15■■■□□ 2.42
VEGFC-202ENST00000618562 PLSCR1O15162 318 aa30.14■■■□□ 2.42
VEGFC-202ENST00000618562 NPHP1O15259 732 aa30.14■■■□□ 2.42
VEGFC-202ENST00000618562 TM4SF1P30408 202 aa30.14■■■□□ 2.42
VEGFC-202ENST00000618562 RASGRF1Q13972 1273 aa30.14■■■□□ 2.42
VEGFC-202ENST00000618562 TTF1Q15361 905 aaPredicted RBP30.14■■■□□ 2.42
VEGFC-202ENST00000618562 ANP32BQ92688 251 aaKnown RBP30.14■■■□□ 2.42
VEGFC-202ENST00000618562 RPS8P62241 208 aaKnown RBP30.13■■■□□ 2.41
VEGFC-202ENST00000618562 CNBD1Q8NA66 436 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 CHAMP1Q96JM3 812 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms