RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DSCC1Q9BVC3 393 aa23.91■■□□□ 1.42
NEK3-208ENST00000618534 AGXT2Q9BYV1 514 aa23.91■■□□□ 1.42
NEK3-208ENST00000618534 SALL1Q9NSC2 1324 aa23.91■■□□□ 1.42
NEK3-208ENST00000618534 KINO60870 393 aaKnown RBP23.9■■□□□ 1.42
NEK3-208ENST00000618534 ENGASEQ8NFI3 743 aa23.9■■□□□ 1.42
NEK3-208ENST00000618534 HELLSQ9NRZ9 838 aa23.9■■□□□ 1.42
NEK3-208ENST00000618534 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
NEK3-208ENST00000618534 DHX40Q8IX18 779 aaKnown RBP23.9■■□□□ 1.42
NEK3-208ENST00000618534 ZNF396Q96N95 335 aaPredicted RBP23.9■■□□□ 1.42
NEK3-208ENST00000618534 BECN2A8MW95 431 aa23.89■■□□□ 1.42
NEK3-208ENST00000618534 E7EWF7 191 aa23.89■■□□□ 1.42
NEK3-208ENST00000618534 FAM160A1Q05DH4 1040 aa23.89■■□□□ 1.42
NEK3-208ENST00000618534 FSIP1Q8NA03 581 aa23.89■■□□□ 1.42
NEK3-208ENST00000618534 PAXBP1Q9Y5B6 917 aa23.89■■□□□ 1.42
NEK3-208ENST00000618534 ME1P48163 572 aa23.89■■□□□ 1.41
NEK3-208ENST00000618534 UTP14CQ5TAP6 766 aaKnown RBP23.89■■□□□ 1.41
NEK3-208ENST00000618534 CHST3Q7LGC8 479 aa23.89■■□□□ 1.41
NEK3-208ENST00000618534 ATG9AQ7Z3C6 839 aa23.89■■□□□ 1.41
NEK3-208ENST00000618534 CCDC112Q8NEF3 446 aa23.89■■□□□ 1.41
NEK3-208ENST00000618534 FMNL2Q96PY5 1086 aa23.89■■□□□ 1.41
NEK3-208ENST00000618534 USP27XA6NNY8 438 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 ZMYM1Q5SVZ6 1142 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 IFNL2Q8IZJ0 200 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 ERCC4Q92889 916 aaPredicted RBP23.88■■□□□ 1.41
NEK3-208ENST00000618534 HSPD1P10809 573 aaKnown RBP23.88■■□□□ 1.41
NEK3-208ENST00000618534 TIMM10P62072 90 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 FOXO4P98177 505 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 NAA30Q147X3 362 aaPredicted RBP23.88■■□□□ 1.41
NEK3-208ENST00000618534 SYCP1Q15431 976 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 ANO10Q9NW15 660 aa23.88■■□□□ 1.41
NEK3-208ENST00000618534 PDIA3P30101 505 aaKnown RBP23.87■■□□□ 1.41
NEK3-208ENST00000618534 CEP135Q66GS9 1140 aa23.87■■□□□ 1.41
NEK3-208ENST00000618534 PLBD2Q8NHP8 589 aa23.87■■□□□ 1.41
NEK3-208ENST00000618534 ZNF592Q92610 1267 aa23.87■■□□□ 1.41
NEK3-208ENST00000618534 MAST3O60307 1309 aa23.86■■□□□ 1.41
NEK3-208ENST00000618534 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
NEK3-208ENST00000618534 ATL3Q6DD88 541 aa23.86■■□□□ 1.41
NEK3-208ENST00000618534 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
NEK3-208ENST00000618534 NEMFO60524 1076 aa23.85■■□□□ 1.41
NEK3-208ENST00000618534 SKILP12757 684 aa23.85■■□□□ 1.41
NEK3-208ENST00000618534 FILIP1Q7Z7B0 1213 aa23.85■■□□□ 1.41
NEK3-208ENST00000618534 FBXW7Q969H0 707 aa23.85■■□□□ 1.41
NEK3-208ENST00000618534 ZHX1Q9UKY1 873 aaPredicted RBP23.85■■□□□ 1.41
NEK3-208ENST00000618534 AOPEPQ8N6M6 819 aa23.85■■□□□ 1.41
NEK3-208ENST00000618534 KIF1AQ12756 1690 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 CCDC69A6NI79 296 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 CYP27B1O15528 508 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 CEP57L1Q8IYX8 460 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 ZNF274Q96GC6 653 aaPredicted RBP23.84■■□□□ 1.41
NEK3-208ENST00000618534 CCZ1BP86790 482 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 CCZ1P86791 482 aaPredicted RBP23.84■■□□□ 1.41
NEK3-208ENST00000618534 TTLL5Q6EMB2 1281 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 PCDHA7Q9UN72 937 aa23.84■■□□□ 1.41
NEK3-208ENST00000618534 ABCC6O95255 1503 aa23.83■■□□□ 1.41
NEK3-208ENST00000618534 H7C1W4 665 aa23.83■■□□□ 1.41
NEK3-208ENST00000618534 FDPSP14324 419 aaKnown RBP23.83■■□□□ 1.41
NEK3-208ENST00000618534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.83■■□□□ 1.414e-7■■■■□ 22.1
NEK3-208ENST00000618534 FMR1NBQ8N0W7 255 aaPredicted RBP23.83■■□□□ 1.41
NEK3-208ENST00000618534 MRPS27Q92552 414 aaKnown RBP23.83■■□□□ 1.41
NEK3-208ENST00000618534 GPHNQ9NQX3 736 aaPredicted RBP23.83■■□□□ 1.41
NEK3-208ENST00000618534 M0R2C6 588 aa23.82■■□□□ 1.4
NEK3-208ENST00000618534 GLI3P10071 1580 aa23.82■■□□□ 1.4
NEK3-208ENST00000618534 RNF113AO15541 343 aaKnown RBP23.82■■□□□ 1.4
NEK3-208ENST00000618534 IFIT1P09914 478 aaKnown RBP23.82■■□□□ 1.4
NEK3-208ENST00000618534 LRRC24Q50LG9 513 aa23.82■■□□□ 1.4
NEK3-208ENST00000618534 NYAP1Q6ZVC0 841 aa23.82■■□□□ 1.4
NEK3-208ENST00000618534 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
NEK3-208ENST00000618534 GPR108Q9NPR9 543 aa23.82■■□□□ 1.4
NEK3-208ENST00000618534 A0A1B0GVL5 298 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 FEZ1Q99689 392 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 IL15P40933 162 aaPredicted RBP23.81■■□□□ 1.4
NEK3-208ENST00000618534 PTPN14Q15678 1187 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 OTUD7BQ6GQQ9 843 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 ZNF594Q96JF6 807 aaPredicted RBP23.81■■□□□ 1.4
NEK3-208ENST00000618534 GTPBP4Q9BZE4 634 aaKnown RBP23.81■■□□□ 1.4
NEK3-208ENST00000618534 RTEL1Q9NZ71 1219 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 CTNNA3Q9UI47 895 aa23.81■■□□□ 1.4
NEK3-208ENST00000618534 ZNF142P52746 1687 aaPredicted RBP23.8■■□□□ 1.4
NEK3-208ENST00000618534 TRMT1Q9NXH9 659 aaKnown RBP23.8■■□□□ 1.4
NEK3-208ENST00000618534 LAMB4A4D0S4 1761 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 NBPF26B4DH59 902 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 NDUFA8P51970 172 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 CABP4P57796 275 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 NBPF14Q5TI25 921 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 NBPF10Q6P3W6 841 aaKnown RBP23.8■■□□□ 1.4
NEK3-208ENST00000618534 NBPF15Q8N660 670 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 SDF4Q9BRK5 362 aa23.8■■□□□ 1.4
NEK3-208ENST00000618534 ADALQ6DHV7 355 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 NAT10Q9H0A0 1025 aaKnown RBP23.79■■□□□ 1.4
NEK3-208ENST00000618534 CGNQ9P2M7 1197 aaKnown RBP23.79■■□□□ 1.4
NEK3-208ENST00000618534 A0A1B0GUL7 405 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 TTLL7Q6ZT98 887 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 NBPF11Q86T75 865 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 OSBP2Q969R2 916 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 CWC25Q9NXE8 425 aaPredicted RBP23.79■■□□□ 1.4
NEK3-208ENST00000618534 CLIC4Q9Y696 253 aa23.79■■□□□ 1.4
NEK3-208ENST00000618534 TJP1Q07157 1748 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms