RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
BRCA1-228ENST00000618469 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
BRCA1-228ENST00000618469 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
BRCA1-228ENST00000618469 API5Q9BZZ5 524 aaKnown RBP20.15■□□□□ 0.82
BRCA1-228ENST00000618469 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
BRCA1-228ENST00000618469 UTYO14607 1347 aa20.15■□□□□ 0.82
BRCA1-228ENST00000618469 ECE2O60344 883 aa20.14■□□□□ 0.81
BRCA1-228ENST00000618469 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
BRCA1-228ENST00000618469 ZC3H12CQ9C0D7 883 aaKnown RBP20.14■□□□□ 0.81
BRCA1-228ENST00000618469 TNRC18O15417 2968 aaPredicted RBP20.14■□□□□ 0.81
BRCA1-228ENST00000618469 POLR2AP24928 1970 aaKnown RBP20.14■□□□□ 0.81
BRCA1-228ENST00000618469 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
BRCA1-228ENST00000618469 DOK7Q18PE1 504 aa20.13■□□□□ 0.81
BRCA1-228ENST00000618469 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
BRCA1-228ENST00000618469 USP48Q86UV5 1035 aa20.13■□□□□ 0.81
BRCA1-228ENST00000618469 KAZALD1Q96I82 304 aa20.13■□□□□ 0.81
BRCA1-228ENST00000618469 PSME4Q14997 1843 aa20.13■□□□□ 0.81
BRCA1-228ENST00000618469 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
BRCA1-228ENST00000618469 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
BRCA1-228ENST00000618469 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
BRCA1-228ENST00000618469 BICC1Q9H694 974 aaKnown RBP20.12■□□□□ 0.81
BRCA1-228ENST00000618469 G3V3G9 751 aa20.11■□□□□ 0.81
BRCA1-228ENST00000618469 SOX10P56693 466 aa20.11■□□□□ 0.81
BRCA1-228ENST00000618469 TNIP1Q15025 636 aa20.11■□□□□ 0.81
BRCA1-228ENST00000618469 DCAF8Q5TAQ9 597 aa20.11■□□□□ 0.81
BRCA1-228ENST00000618469 WTIPA6NIX2 430 aaPredicted RBP20.1■□□□□ 0.81
BRCA1-228ENST00000618469 CA12O43570 354 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 BCAR3O75815 825 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 HUNKP57058 714 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 CHRNDQ07001 517 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 ZNF594Q96JF6 807 aaPredicted RBP20.1■□□□□ 0.81
BRCA1-228ENST00000618469 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
BRCA1-228ENST00000618469 CNOT7Q9UIV1 285 aaKnown RBP20.1■□□□□ 0.81
BRCA1-228ENST00000618469 PSMD14O00487 310 aa20.09■□□□□ 0.81
BRCA1-228ENST00000618469 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
BRCA1-228ENST00000618469 ANKRD44Q8N8A2 993 aa20.09■□□□□ 0.81
BRCA1-228ENST00000618469 FRAT1Q92837 279 aaPredicted RBP20.09■□□□□ 0.81
BRCA1-228ENST00000618469 PGAP2Q9UHJ9 254 aa20.09■□□□□ 0.81
BRCA1-228ENST00000618469 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
BRCA1-228ENST00000618469 KCNJ4P48050 445 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 CDC37L1Q7L3B6 337 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 ARHGAP45Q92619 1136 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 CNNM1Q9NRU3 951 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
BRCA1-228ENST00000618469 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 ZNF646O15015 1829 aaPredicted RBP20.07■□□□□ 0.8
BRCA1-228ENST00000618469 PDE4DIPQ5VU43 2346 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 MICALL2Q8IY33 904 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 HHIPL1Q96JK4 782 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 KCNQ5Q9NR82 932 aa20.07■□□□□ 0.8
BRCA1-228ENST00000618469 IPO8O15397 1037 aaKnown RBP20.06■□□□□ 0.8
BRCA1-228ENST00000618469 EGFRP00533 1210 aa20.06■□□□□ 0.8
BRCA1-228ENST00000618469 UBTFL1P0CB47 393 aaPredicted RBP20.06■□□□□ 0.8
BRCA1-228ENST00000618469 TRIM27P14373 513 aa20.06■□□□□ 0.8
BRCA1-228ENST00000618469 KLRK1P26718 216 aa20.06■□□□□ 0.8
BRCA1-228ENST00000618469 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
BRCA1-228ENST00000618469 HELBQ8NG08 1087 aaPredicted RBP20.06■□□□□ 0.8
BRCA1-228ENST00000618469 TAF5LO75529 589 aa20.05■□□□□ 0.8
BRCA1-228ENST00000618469 NOGQ13253 232 aa20.05■□□□□ 0.8
BRCA1-228ENST00000618469 TBC1D10BQ4KMP7 808 aaPredicted RBP20.05■□□□□ 0.8
BRCA1-228ENST00000618469 ATF7IPQ6VMQ6 1270 aa20.05■□□□□ 0.8
BRCA1-228ENST00000618469 PCDH10Q9P2E7 1040 aa20.05■□□□□ 0.8
BRCA1-228ENST00000618469 TNNQ9UQP3 1299 aa20.05■□□□□ 0.8
BRCA1-228ENST00000618469 ADM5C9JUS6 153 aa20.04■□□□□ 0.8
BRCA1-228ENST00000618469 H7C1D1 291 aa20.04■□□□□ 0.8
BRCA1-228ENST00000618469 TXNRD3Q86VQ6 643 aa20.04■□□□□ 0.8
BRCA1-228ENST00000618469 MEIS3Q99687 375 aa20.04■□□□□ 0.8
BRCA1-228ENST00000618469 FAM155AB1AL88 458 aaPredicted RBP20.03■□□□□ 0.8
BRCA1-228ENST00000618469 SNAP23O00161 211 aa20.03■□□□□ 0.8
BRCA1-228ENST00000618469 TRPA1O75762 1119 aa20.03■□□□□ 0.8
BRCA1-228ENST00000618469 KIF23Q02241 960 aaPredicted RBP20.03■□□□□ 0.8
BRCA1-228ENST00000618469 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
BRCA1-228ENST00000618469 INTS3Q68E01 1043 aaKnown RBP20.03■□□□□ 0.8
BRCA1-228ENST00000618469 ZC3H15Q8WU90 426 aaKnown RBP20.03■□□□□ 0.8
BRCA1-228ENST00000618469 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
BRCA1-228ENST00000618469 PUS3Q9BZE2 481 aaKnown RBP20.03■□□□□ 0.8
BRCA1-228ENST00000618469 ZNF609O15014 1411 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 AKAP11Q9UKA4 1901 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 PLIN1O60240 522 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 RPS12P25398 132 aaKnown RBP20.02■□□□□ 0.8
BRCA1-228ENST00000618469 RGMBQ6NW40 437 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 PODNQ7Z5L7 613 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 FBXW7Q969H0 707 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
BRCA1-228ENST00000618469 LRRFIP2Q9Y608 721 aaKnown RBP20.02■□□□□ 0.8
BRCA1-228ENST00000618469 DPF2Q92785 391 aa20.01■□□□□ 0.79
BRCA1-228ENST00000618469 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
BRCA1-228ENST00000618469 USP17L3A6NCW0 530 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 USP17L4A6NCW7 530 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
BRCA1-228ENST00000618469 ZNF157P51786 506 aaPredicted RBP20■□□□□ 0.79
BRCA1-228ENST00000618469 RSBN1LQ6PCB5 846 aaPredicted RBP20■□□□□ 0.79
BRCA1-228ENST00000618469 USP17L1Q7RTZ2 530 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 RNF186Q9NXI6 227 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 ASTN2O75129 1339 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms