RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 MYH3P11055 1940 aa11.98□□□□□ -0.49
PSMB3-210ENST00000618159 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
PSMB3-210ENST00000618159 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
PSMB3-210ENST00000618159 INHBEP58166 350 aa11.98□□□□□ -0.49
PSMB3-210ENST00000618159 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
PSMB3-210ENST00000618159 MXD3Q9BW11 206 aa11.98□□□□□ -0.49
PSMB3-210ENST00000618159 ANGEL1Q9UNK9 670 aaKnown RBP11.98□□□□□ -0.49
PSMB3-210ENST00000618159 LAMA3Q16787 3333 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 NEFMP07197 916 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 CRHR2Q13324 411 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 PODNQ7Z5L7 613 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
PSMB3-210ENST00000618159 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.49
PSMB3-210ENST00000618159 SASH1O94885 1247 aa11.96□□□□□ -0.49
PSMB3-210ENST00000618159 DACT2Q5SW24 774 aa11.96□□□□□ -0.49
PSMB3-210ENST00000618159 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
PSMB3-210ENST00000618159 CLMNQ96JQ2 1002 aa11.96□□□□□ -0.49
PSMB3-210ENST00000618159 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
PSMB3-210ENST00000618159 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
PSMB3-210ENST00000618159 XDHP47989 1333 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
PSMB3-210ENST00000618159 SP3Q02447 781 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
PSMB3-210ENST00000618159 MAP3K11Q16584 847 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 KRT24Q2M2I5 525 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
PSMB3-210ENST00000618159 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
PSMB3-210ENST00000618159 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
PSMB3-210ENST00000618159 GJA5P36382 358 aa11.94□□□□□ -0.5
PSMB3-210ENST00000618159 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
PSMB3-210ENST00000618159 ZBED3Q96IU2 234 aaPredicted RBP11.94□□□□□ -0.5
PSMB3-210ENST00000618159 PTPN18Q99952 460 aa11.94□□□□□ -0.5
PSMB3-210ENST00000618159 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
PSMB3-210ENST00000618159 COL1A1P02452 1464 aaPredicted RBP11.94□□□□□ -0.5
PSMB3-210ENST00000618159 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
PSMB3-210ENST00000618159 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
PSMB3-210ENST00000618159 SLC4A8Q2Y0W8 1093 aa11.93□□□□□ -0.5
PSMB3-210ENST00000618159 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
PSMB3-210ENST00000618159 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
PSMB3-210ENST00000618159 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
PSMB3-210ENST00000618159 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
PSMB3-210ENST00000618159 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
PSMB3-210ENST00000618159 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
PSMB3-210ENST00000618159 NBPF11Q86T75 865 aa11.92□□□□□ -0.5
PSMB3-210ENST00000618159 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
PSMB3-210ENST00000618159 PRO3102Q9H379 93 aa11.92□□□□□ -0.5
PSMB3-210ENST00000618159 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
PSMB3-210ENST00000618159 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
PSMB3-210ENST00000618159 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
PSMB3-210ENST00000618159 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
PSMB3-210ENST00000618159 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
PSMB3-210ENST00000618159 CCDC85AQ96PX6 553 aaPredicted RBP11.91□□□□□ -0.5
PSMB3-210ENST00000618159 DEFB129Q9H1M3 183 aa11.91□□□□□ -0.5
PSMB3-210ENST00000618159 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
PSMB3-210ENST00000618159 MMP14P50281 582 aa11.9□□□□□ -0.5
PSMB3-210ENST00000618159 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
PSMB3-210ENST00000618159 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
PSMB3-210ENST00000618159 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 UNCXA6NJT0 531 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
PSMB3-210ENST00000618159 PDE8AO60658 829 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 RIPK4P57078 832 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 TXNRD3Q86VQ6 643 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
PSMB3-210ENST00000618159 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 COA1Q9GZY4 146 aa11.89□□□□□ -0.51
PSMB3-210ENST00000618159 ALPK3Q96L96 1907 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 A0A1B0GUL6 1792 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 USP2O75604 605 aaPredicted RBP11.88□□□□□ -0.51
PSMB3-210ENST00000618159 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
PSMB3-210ENST00000618159 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
PSMB3-210ENST00000618159 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
PSMB3-210ENST00000618159 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 TTLL5Q6EMB2 1281 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 DPF3Q92784 378 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
PSMB3-210ENST00000618159 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
PSMB3-210ENST00000618159 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
PSMB3-210ENST00000618159 CHL1O00533 1208 aa11.87□□□□□ -0.51
PSMB3-210ENST00000618159 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
PSMB3-210ENST00000618159 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
PSMB3-210ENST00000618159 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
PSMB3-210ENST00000618159 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
PSMB3-210ENST00000618159 PPP2R3BQ9Y5P8 575 aa11.87□□□□□ -0.51
PSMB3-210ENST00000618159 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
PSMB3-210ENST00000618159 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
PSMB3-210ENST00000618159 KLRK1P26718 216 aa11.86□□□□□ -0.51
PSMB3-210ENST00000618159 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
PSMB3-210ENST00000618159 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
PSMB3-210ENST00000618159 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
PSMB3-210ENST00000618159 MTFR1Q15390 333 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms