RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 ATP2B4P23634 1241 aa15.51■□□□□ 0.07
COL4A2-210ENST00000617564 GNAI1P63096 354 aa15.51■□□□□ 0.07
COL4A2-210ENST00000617564 ANKRD18AQ8IVF6 992 aa15.51■□□□□ 0.07
COL4A2-210ENST00000617564 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
COL4A2-210ENST00000617564 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
COL4A2-210ENST00000617564 ASTN2O75129 1339 aaPredicted RBP15.5■□□□□ 0.07
COL4A2-210ENST00000617564 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
COL4A2-210ENST00000617564 FKTNO75072 461 aa15.5■□□□□ 0.07
COL4A2-210ENST00000617564 DDX58O95786 925 aaKnown RBP15.5■□□□□ 0.07
COL4A2-210ENST00000617564 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
COL4A2-210ENST00000617564 PODNQ7Z5L7 613 aa15.5■□□□□ 0.07
COL4A2-210ENST00000617564 GMLQ99445 158 aa15.5■□□□□ 0.07
COL4A2-210ENST00000617564 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
COL4A2-210ENST00000617564 HTTP42858 3142 aa15.5■□□□□ 0.07
COL4A2-210ENST00000617564 TRIOBPQ9H2D6 2365 aa15.5■□□□□ 0.07
COL4A2-210ENST00000617564 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
COL4A2-210ENST00000617564 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 USP17L8P0C7I0 530 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 EN2P19622 333 aaPredicted RBP15.49■□□□□ 0.07
COL4A2-210ENST00000617564 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
COL4A2-210ENST00000617564 SCARF1Q14162 830 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 CDC5LQ99459 802 aaKnown RBP15.49■□□□□ 0.07
COL4A2-210ENST00000617564 MYOZ2Q9NPC6 264 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
COL4A2-210ENST00000617564 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
COL4A2-210ENST00000617564 CTSWP56202 376 aa15.47■□□□□ 0.07
COL4A2-210ENST00000617564 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
COL4A2-210ENST00000617564 CUL9Q8IWT3 2517 aa15.47■□□□□ 0.07
COL4A2-210ENST00000617564 MYO3BQ8WXR4 1341 aa15.46■□□□□ 0.07
COL4A2-210ENST00000617564 H0YGN5 161 aa15.46■□□□□ 0.07
COL4A2-210ENST00000617564 MMP14P50281 582 aa15.46■□□□□ 0.07
COL4A2-210ENST00000617564 CCDC85AQ96PX6 553 aaPredicted RBP15.46■□□□□ 0.07
COL4A2-210ENST00000617564 TRIM17Q9Y577 477 aa15.46■□□□□ 0.07
COL4A2-210ENST00000617564 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
COL4A2-210ENST00000617564 APAF1O14727 1248 aa15.45■□□□□ 0.06
COL4A2-210ENST00000617564 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
COL4A2-210ENST00000617564 BSDC1Q9NW68 430 aaPredicted RBP15.45■□□□□ 0.06
COL4A2-210ENST00000617564 MAP3K2Q9Y2U5 619 aa15.45■□□□□ 0.06
COL4A2-210ENST00000617564 TM4SF4P48230 202 aa15.44■□□□□ 0.06
COL4A2-210ENST00000617564 KSR2Q6VAB6 950 aa15.44■□□□□ 0.06
COL4A2-210ENST00000617564 TTLL11Q8NHH1 800 aa15.44■□□□□ 0.06
COL4A2-210ENST00000617564 PRKRIP1Q9H875 184 aaPredicted RBP15.44■□□□□ 0.06
COL4A2-210ENST00000617564 RBM27Q9P2N5 1060 aaKnown RBP15.44■□□□□ 0.06
COL4A2-210ENST00000617564 MINPP1Q9UNW1 487 aa15.44■□□□□ 0.06
COL4A2-210ENST00000617564 MYH3P11055 1940 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 KIAA0100Q14667 2235 aaKnown RBP15.43■□□□□ 0.06
COL4A2-210ENST00000617564 IGKV5-2P06315 115 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
COL4A2-210ENST00000617564 NF2P35240 595 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 CCT4P50991 539 aaKnown RBP15.43■□□□□ 0.06
COL4A2-210ENST00000617564 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 DACT2Q5SW24 774 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 STRIP1Q5VSL9 837 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
COL4A2-210ENST00000617564 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
COL4A2-210ENST00000617564 ZNF646O15015 1829 aaPredicted RBP15.43■□□□□ 0.06
COL4A2-210ENST00000617564 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
COL4A2-210ENST00000617564 CFHR5Q9BXR6 569 aa15.42■□□□□ 0.06
COL4A2-210ENST00000617564 GREM2Q9H772 168 aa15.42■□□□□ 0.06
COL4A2-210ENST00000617564 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
COL4A2-210ENST00000617564 PI4KAP2A4QPH2 592 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 WNT10BO00744 389 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
COL4A2-210ENST00000617564 NBPF9Q3BBW0 867 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 PI4KAP1Q8N8J0 262 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
COL4A2-210ENST00000617564 RANBP2P49792 3224 aaKnown RBP15.41■□□□□ 0.06
COL4A2-210ENST00000617564 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 COL1A1P02452 1464 aaPredicted RBP15.4■□□□□ 0.06
COL4A2-210ENST00000617564 NEURL1BA8MQ27 555 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 UBE2Q2LH0YL09 131 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 MOB2Q70IA6 237 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 APOBEC3FQ8IUX4 373 aaKnown RBP15.4■□□□□ 0.06
COL4A2-210ENST00000617564 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
COL4A2-210ENST00000617564 H7C1W4 665 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
COL4A2-210ENST00000617564 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 PLA2G12BQ9BX93 195 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 PTPN22Q9Y2R2 807 aa15.39■□□□□ 0.05
COL4A2-210ENST00000617564 PRAMEF18Q5VWM3 479 aa15.38■□□□□ 0.05
COL4A2-210ENST00000617564 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
COL4A2-210ENST00000617564 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
COL4A2-210ENST00000617564 MXD3Q9BW11 206 aa15.38■□□□□ 0.05
COL4A2-210ENST00000617564 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
COL4A2-210ENST00000617564 ZNF804BA4D1E1 1349 aa15.38■□□□□ 0.05
COL4A2-210ENST00000617564 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
COL4A2-210ENST00000617564 SASH1O94885 1247 aa15.37■□□□□ 0.05
COL4A2-210ENST00000617564 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
COL4A2-210ENST00000617564 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
COL4A2-210ENST00000617564 CEP290O15078 2479 aa15.36■□□□□ 0.05
COL4A2-210ENST00000617564 ITGA6P23229 1130 aa15.36■□□□□ 0.05
COL4A2-210ENST00000617564 CCDC27Q2M243 656 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms