RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	PHLPP2	Q6ZVD8	1323 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	MNAT1	P51948	309 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	E4F1	Q66K89	784 aa	Predicted RBP	13.41	□□□□□ -0.26
TP53-222	ENST00000617185	TACO1	Q9BSH4	297 aa	Known RBP	13.41	□□□□□ -0.26
TP53-222	ENST00000617185	ANO2	Q9NQ90	1003 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	KIF24	Q5T7B8	1368 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.41	□□□□□ -0.26
TP53-222	ENST00000617185	USP44	Q9H0E7	712 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	DACT1	Q9NYF0	836 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	CHMP3	Q9Y3E7	222 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	USP16	Q9Y5T5	823 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185		H3BQF6	201 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	RNMT	O43148	476 aa	Known RBP	13.41	□□□□□ -0.26
TP53-222	ENST00000617185	KCNJ6	P48051	423 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	EVC	P57679	992 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.41	□□□□□ -0.26
TP53-222	ENST00000617185	AKAP4	Q5JQC9	854 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	FAM107B	Q9H098	131 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	OSBPL3	Q9H4L5	887 aa		13.41	□□□□□ -0.26
TP53-222	ENST00000617185	KIF3C	O14782	793 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	SMC2	O95347	1197 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	MAP4K4	O95819	1239 aa	Predicted RBP	13.4	□□□□□ -0.26
TP53-222	ENST00000617185	ETF1	P62495	437 aa	Known RBP	13.4	□□□□□ -0.26
TP53-222	ENST00000617185	KRT85	P78386	507 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	MICALL1	Q8N3F8	863 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	CLSTN2	Q9H4D0	955 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	VPS18	Q9P253	973 aa		13.4	□□□□□ -0.26
TP53-222	ENST00000617185	IRF6	O14896	467 aa		13.4	□□□□□ -0.27
TP53-222	ENST00000617185	PPP2R5A	Q15172	486 aa		13.4	□□□□□ -0.27
TP53-222	ENST00000617185	HOMER1	Q86YM7	354 aa		13.4	□□□□□ -0.27
TP53-222	ENST00000617185	TTC41P	Q6P2S7	1318 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	UBTFL1	P0CB47	393 aa	Predicted RBP	13.39	□□□□□ -0.27
TP53-222	ENST00000617185	EIF5	P55010	431 aa	Known RBP	13.39	□□□□□ -0.27
TP53-222	ENST00000617185	MTMR6	Q9Y217	621 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	CEMIP	Q8WUJ3	1361 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	GOLGA6L4	A6NEF3	574 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	NRDC	O43847	1150 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	IQCB1	Q15051	598 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	JAKMIP3	Q5VZ66	844 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	TTC6	Q86TZ1	520 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	CARD6	Q9BX69	1037 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	DNAI1	Q9UI46	699 aa		13.39	□□□□□ -0.27
TP53-222	ENST00000617185	CCP110	O43303	1012 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	HMMR	O75330	724 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	MYL6B	P14649	208 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	CWF19L2	Q2TBE0	894 aa	Known RBP	13.38	□□□□□ -0.27
TP53-222	ENST00000617185	NUTM1	Q86Y26	1132 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	ERC1	Q8IUD2	1116 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	IMPACT	Q9P2X3	320 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	RGPD5	Q99666	1765 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	MAP2K7	O14733	419 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	SRGAP3	O43295	1099 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	EPB41L2	O43491	1005 aa	Known RBP	13.38	□□□□□ -0.27
TP53-222	ENST00000617185	RILPL2	Q969X0	211 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.38	□□□□□ -0.27
TP53-222	ENST00000617185	DNAJC5	Q9H3Z4	198 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	LIMCH1	Q9UPQ0	1083 aa		13.38	□□□□□ -0.27
TP53-222	ENST00000617185	ANKRD65	E5RJM6	399 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	URI1	O94763	535 aa	Predicted RBP	13.37	□□□□□ -0.27
TP53-222	ENST00000617185	PDE1A	P54750	535 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	TBC1D22A	Q8WUA7	517 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	RAPGEF4	Q8WZA2	1011 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	SYTL4	Q96C24	671 aa	Predicted RBP	13.37	□□□□□ -0.27
TP53-222	ENST00000617185	ERLIN2	O94905	339 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	DHX8	Q14562	1220 aa	Known RBP	13.37	□□□□□ -0.27
TP53-222	ENST00000617185	LONRF2	Q1L5Z9	754 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	MAP9	Q49MG5	647 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	LRRC31	Q6UY01	552 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	JMY	Q8N9B5	988 aa		13.37	□□□□□ -0.27
TP53-222	ENST00000617185	SGSM2	O43147	1006 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	C21orf2	O43822	256 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	PPFIA4	O75335	1185 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	APOBR	Q0VD83	1088 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	TTLL5	Q6EMB2	1281 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	NPHP3	Q7Z494	1330 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	PPP1R42	Q7Z4L9	355 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	CCDC150	Q8NCX0	1101 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	USP54	Q70EL1	1684 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	CCDC151	A5D8V7	595 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	BECN2	A8MW95	431 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	SURF6	O75683	361 aa	Known RBP	13.36	□□□□□ -0.27
TP53-222	ENST00000617185	GNAI3	P08754	354 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	MSL3	Q8N5Y2	521 aa	Known RBP	13.36	□□□□□ -0.27
TP53-222	ENST00000617185	STAG1	Q8WVM7	1258 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	PARD6B	Q9BYG5	372 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	LRRC37A3	O60309	1634 aa		13.36	□□□□□ -0.27
TP53-222	ENST00000617185	EIF3J	O75822	258 aa	Known RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	GJB2	P29033	226 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	HNRNPH1	P31943	449 aa	Known RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	GNL2	Q13823	731 aa	Known RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	C11orf91	Q3C1V1	193 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	CWC27	Q6UX04	472 aa	Known RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	NBPF11	Q86T75	865 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	UNC5CL	Q8IV45	518 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	LRRCC1	Q9C099	1032 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	MAP3K2	Q9Y2U5	619 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	FAM208A	Q9UK61	1670 aa	Known RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	VPS37C	A5D8V6	355 aa	Predicted RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	CHML	P26374	656 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	ATP8B2	P98198	1209 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms