RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 GAS2O43903 313 aaKnown RBP5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 XYLBO75191 536 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 ABL2P42684 1182 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 FAM117BQ6P1L5 589 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 FDX2Q6P4F2 183 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 LARGE2Q8N3Y3 721 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 ZSCAN18Q8TBC5 510 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 CHMP7Q8WUX9 453 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 KLK14Q9P0G3 267 aa5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 RTCBQ9Y3I0 505 aaKnown RBP5.58□□□□□ -1.52
HMGB1P24-202ENST00000615653 OPLAHO14841 1288 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 RAD21O60216 631 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 PLCL1Q15111 1095 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 WFDC3Q8IUB2 231 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 GLIS3Q8NEA6 775 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 LACRTQ9GZZ8 138 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 ADAM19Q9H013 955 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 SEC31BQ9NQW1 1179 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 COG6Q9Y2V7 657 aa5.57□□□□□ -1.52
HMGB1P24-202ENST00000615653 MEGF11A6BM72 1044 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 DKK1O94907 266 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 RXRBP28702 533 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 ADAMTSL4Q6UY14 1074 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 SIX5Q8N196 739 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 RUSC1Q9BVN2 902 aa5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 ZC3H7BQ9UGR2 993 aaKnown RBP5.56□□□□□ -1.52
HMGB1P24-202ENST00000615653 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 PALM3A6NDB9 673 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 CDC25BP30305 580 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 ADMP35318 185 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 CEP135Q66GS9 1140 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 PAOXQ6QHF9 649 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 ZAR1Q86SH2 424 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 ALG2Q9H553 416 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 LMCD1Q9NZU5 365 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 SLC5A6Q9Y289 635 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 USP20Q9Y2K6 914 aa5.55□□□□□ -1.52
HMGB1P24-202ENST00000615653 SMNDC1O75940 238 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 RASA1P20936 1047 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 EPHA1P21709 976 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 DGKZQ13574 1117 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 NFKBIBQ15653 356 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 PLEKHM2Q8IWE5 1019 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 LRRC56Q8IYG6 542 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 WNT8BQ93098 351 aa5.54□□□□□ -1.52
HMGB1P24-202ENST00000615653 ZSCAN22P10073 491 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 ATP11AP98196 1134 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 ZNF574Q6ZN55 896 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 GATA6Q92908 595 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 TBC1D32Q96NH3 1257 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 OSGEPQ9NPF4 335 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 PRKAG2Q9UGJ0 569 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 KCNMB2Q9Y691 235 aa5.53□□□□□ -1.52
HMGB1P24-202ENST00000615653 FAM170BA6NMN3 283 aa5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 TSPAN15O95858 294 aa5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 CRTC2Q53ET0 693 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 SPRED2Q7Z698 418 aa5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 STK11IPQ8N1F8 1099 aa5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 CMTR1Q8N1G2 835 aaKnown RBP5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 SH2B1Q9NRF2 756 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P24-202ENST00000615653 TIAF1O95411 115 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 PIP4K2BP78356 416 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 ECM1Q16610 540 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 C11orf91Q3C1V1 193 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 COL13A1Q5TAT6 717 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 NLRP13Q86W25 1043 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 POM121Q96HA1 1249 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 CSRNP1Q96S65 589 aa5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 RC3H2Q9HBD1 1191 aaKnown RBP5.51□□□□□ -1.53
HMGB1P24-202ENST00000615653 IGFBP4P22692 258 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 RGL4Q8IZJ4 473 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 SMG8Q8ND04 991 aaKnown RBP5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 OR13H1Q8NG92 308 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 SPACA7Q96KW9 195 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 TMPRSS13Q9BYE2 586 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 ZMYND15Q9H091 742 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 SUGCTQ9HAC7 445 aa5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 RBM19Q9Y4C8 960 aaKnown RBP5.5□□□□□ -1.53
HMGB1P24-202ENST00000615653 USP17L3A6NCW0 530 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 USP17L4A6NCW7 530 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 LRRC10BA6NIK2 292 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 H3BRJ5 948 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 PTPRAP18433 802 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 FUT4P22083 530 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 NLRP12P59046 1061 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 HYAL2Q12891 473 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 USP17L2Q6R6M4 530 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 USP17L1Q7RTZ2 530 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 C12orf50Q8NA57 414 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 EZH1Q92800 747 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P24-202ENST00000615653 MYO19Q96H55 970 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms