RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 A0A087WZG4 1122 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 CBFA2T2O43439 604 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 STX17P56962 302 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 ADKP55263 362 aaKnown RBP13.6□□□□□ -0.23
CDH5-208ENST00000614547 PPARDQ03181 441 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
CDH5-208ENST00000614547 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
CDH5-208ENST00000614547 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 COPS6Q7L5N1 327 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 PCMTD1Q96MG8 357 aaPredicted RBP13.6□□□□□ -0.23
CDH5-208ENST00000614547 GLI2P10070 1586 aa13.6□□□□□ -0.23
CDH5-208ENST00000614547 TPM1P09493 284 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 IFIT1P09914 478 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 KSR2Q6VAB6 950 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 MTX1Q13505 466 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 SRRTQ9BXP5 876 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
CDH5-208ENST00000614547 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
CDH5-208ENST00000614547 DHX16O60231 1041 aaKnown RBP13.58□□□□□ -0.23
CDH5-208ENST00000614547 ZNF202O95125 648 aa13.58□□□□□ -0.23
CDH5-208ENST00000614547 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.23
CDH5-208ENST00000614547 RESTQ13127 1097 aa13.58□□□□□ -0.23
CDH5-208ENST00000614547 TXLNBQ8N3L3 684 aa13.58□□□□□ -0.23
CDH5-208ENST00000614547 CAGE1Q8TC20 777 aa13.58□□□□□ -0.23
CDH5-208ENST00000614547 PLEKHA4Q9H4M7 779 aa13.58□□□□□ -0.23
CDH5-208ENST00000614547 CYP21A2P08686 494 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 RBM6P78332 1123 aaKnown RBP13.58□□□□□ -0.24
CDH5-208ENST00000614547 PPP2R3AQ06190 1150 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 ZSCAN26Q16670 478 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.24
CDH5-208ENST00000614547 ELP1O95163 1332 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
CDH5-208ENST00000614547 TAF5LO75529 589 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 SASH1O94885 1247 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 PNOCQ13519 176 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
CDH5-208ENST00000614547 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
CDH5-208ENST00000614547 ST5P78524 1137 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH5-208ENST00000614547 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
CDH5-208ENST00000614547 JMYQ8N9B5 988 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 RASSF4Q9H2L5 321 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 HOOK1Q9UJC3 728 aaKnown RBP13.57□□□□□ -0.24
CDH5-208ENST00000614547 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
CDH5-208ENST00000614547 FLT4P35916 1363 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
CDH5-208ENST00000614547 IQCB1Q15051 598 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 HOXC9P31274 260 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 AFMP43652 599 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 CCZ1BP86790 482 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
CDH5-208ENST00000614547 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
CDH5-208ENST00000614547 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
CDH5-208ENST00000614547 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
CDH5-208ENST00000614547 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 KIF5CO60282 957 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 POLA2Q14181 598 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 E4F1Q66K89 784 aaPredicted RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 BAG1Q99933 345 aaPredicted RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 COBLO75128 1261 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 ERLIN1O75477 346 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 CLIC6Q96NY7 704 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 DIP2CQ9Y2E4 1556 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 TRIM66O15016 1216 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 ZNF569Q5MCW4 686 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms