RNA–Protein interactions for RNA: ENST00000613776.1

ACACA-229, Transcript of acetyl-CoA carboxylase alpha, human

TSL 2

Gene ACACA, Length 1,372 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-229	ENST00000613776	GML	Q99445	158 aa		13.71	□□□□□ -0.21
ACACA-229	ENST00000613776	RNF208	Q9H0X6	261 aa		13.71	□□□□□ -0.21
ACACA-229	ENST00000613776	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.71	□□□□□ -0.21
ACACA-229	ENST00000613776	LAMB2	P55268	1798 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	LRRC37A	A6NMS7	1700 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	MAP3K12	Q12852	859 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	TAF1C	Q15572	869 aa	Predicted RBP	13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	GAS2L2	Q8NHY3	880 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	U2AF1L4	Q8WU68	220 aa	Known RBP	13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	POLR3GL	Q9BT43	218 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	ZFYVE28	Q9HCC9	887 aa		13.71	□□□□□ -0.22
ACACA-229	ENST00000613776	TESPA1	A2RU30	521 aa	Predicted RBP	13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	WNT10B	O00744	389 aa		13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	KIF22	Q14807	665 aa		13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	MAFA	Q8NHW3	353 aa	Predicted RBP	13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	TBC1D16	Q8TBP0	767 aa		13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	SNX27	Q96L92	541 aa		13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	RRP7A	Q9Y3A4	280 aa	Known RBP	13.7	□□□□□ -0.22
ACACA-229	ENST00000613776	LAMB1	P07942	1786 aa		13.69	□□□□□ -0.22
ACACA-229	ENST00000613776	ANKRD36C	Q5JPF3	1778 aa		13.69	□□□□□ -0.22
ACACA-229	ENST00000613776	MYL6B	P14649	208 aa		13.69	□□□□□ -0.22
ACACA-229	ENST00000613776	C7orf61	Q8IZ16	206 aa		13.69	□□□□□ -0.22
ACACA-229	ENST00000613776	POTEB2	H3BUK9	544 aa		13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	GRK4	P32298	578 aa		13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	MAGEA10	P43363	369 aa	Predicted RBP	13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	LACTB	P83111	547 aa	Predicted RBP	13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	MAP3K11	Q16584	847 aa		13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	BIN2	Q9UBW5	565 aa	Predicted RBP	13.68	□□□□□ -0.22
ACACA-229	ENST00000613776	SASH1	O94885	1247 aa		13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	SYN1	P17600	705 aa		13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	PRMT2	P55345	433 aa		13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	CELF1	Q92879	486 aa	Known RBP	13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	UBE2O	Q9C0C9	1292 aa	Known RBP	13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	EYS	Q5T1H1	3165 aa		13.67	□□□□□ -0.22
ACACA-229	ENST00000613776	PPP1R12B	O60237	982 aa	Predicted RBP	13.66	□□□□□ -0.22
ACACA-229	ENST00000613776	GNRH1	P01148	92 aa		13.66	□□□□□ -0.22
ACACA-229	ENST00000613776	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.66	□□□□□ -0.22
ACACA-229	ENST00000613776	RIPOR2	Q9Y4F9	1068 aa		13.66	□□□□□ -0.22
ACACA-229	ENST00000613776	ALPK3	Q96L96	1907 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	MUC3A	Q02505	3323 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	USP17L3	A6NCW0	530 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	USP17L4	A6NCW7	530 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	SGPL1	O95470	568 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	USP17L1	Q7RTZ2	530 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	RAET1E	Q8TD07	263 aa		13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	CDX2	Q99626	313 aa	Predicted RBP	13.65	□□□□□ -0.22
ACACA-229	ENST00000613776	UFL1	O94874	794 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	TFRC	P02786	760 aa	Known RBP	13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	UBXN2A	P68543	259 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	OGFOD1	Q8N543	542 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	BRI3BP	Q8WY22	251 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	PAWR	Q96IZ0	340 aa	Known RBP	13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	MS4A4A	Q96JQ5	239 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	MXD3	Q9BW11	206 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	UNC93B1	Q9H1C4	597 aa		13.64	□□□□□ -0.23
ACACA-229	ENST00000613776	SSC5D	A1L4H1	1573 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	DIAPH1	O60610	1272 aa	Known RBP	13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	FAM43A	Q8N2R8	423 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	OPTN	Q96CV9	577 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	TRIM47	Q96LD4	638 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	SRRD	Q9UH36	339 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	SYNGAP1	Q96PV0	1343 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	CLSPN	Q9HAW4	1339 aa		13.63	□□□□□ -0.23
ACACA-229	ENST00000613776	PRUNE2	Q8WUY3	3088 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	CCL15-CCL14	A0A0B4J2E2	113 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	TLR2	O60603	784 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	CTGF	P29279	349 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	CCL15	Q16663	113 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	TJAP1	Q5JTD0	557 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	ZNF697	Q5TEC3	545 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	DEFB129	Q9H1M3	183 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	PANK3	Q9H999	370 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	ELP3	Q9H9T3	547 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	PSME4	Q14997	1843 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	COL4A1	P02462	1669 aa		13.62	□□□□□ -0.23
ACACA-229	ENST00000613776	UNCX	A6NJT0	531 aa		13.61	□□□□□ -0.23
ACACA-229	ENST00000613776	MCM10	Q7L590	875 aa		13.61	□□□□□ -0.23
ACACA-229	ENST00000613776	ZNF428	Q96B54	188 aa		13.61	□□□□□ -0.23
ACACA-229	ENST00000613776	TRMT112	Q9UI30	125 aa	Known RBP	13.61	□□□□□ -0.23
ACACA-229	ENST00000613776	OSBP	P22059	807 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	PSMC4	P43686	418 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	IREB2	P48200	963 aa	Known RBP	13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	DIS3L	Q8TF46	1054 aa	Known RBP	13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	FBXW7	Q969H0	707 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	MIS18A	Q9NYP9	233 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	ANKIB1	Q9P2G1	1089 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	GGA1	Q9UJY5	639 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	SH3TC1	Q8TE82	1336 aa		13.6	□□□□□ -0.23
ACACA-229	ENST00000613776	USP2	O75604	605 aa	Predicted RBP	13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	WDHD1	O75717	1129 aa	Predicted RBP	13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	HOXD10	P28358	340 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	NECAB2	Q7Z6G3	386 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	NLRP10	Q86W26	655 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	ANKRD13A	Q8IZ07	590 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	CNKSR2	Q8WXI2	1034 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	PODXL2	Q9NZ53	605 aa		13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	MYPN	Q86TC9	1320 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms