RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 C22orf23Q9BZE7 217 aa10.89□□□□□ -0.67
CCDC47-207ENST00000612558 NARFQ9UHQ1 456 aa10.89□□□□□ -0.67
CCDC47-207ENST00000612558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.89□□□□□ -0.67
CCDC47-207ENST00000612558 TAF1LQ8IZX4 1826 aa10.89□□□□□ -0.67
CCDC47-207ENST00000612558 TRIM37O94972 964 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 RILPL2Q969X0 211 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 GPR108Q9NPR9 543 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 MYH3P11055 1940 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 TUBGCP6Q96RT7 1819 aa10.88□□□□□ -0.67
CCDC47-207ENST00000612558 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
CCDC47-207ENST00000612558 ZPR1O75312 459 aa10.87□□□□□ -0.67
CCDC47-207ENST00000612558 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
CCDC47-207ENST00000612558 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
CCDC47-207ENST00000612558 FBXO41Q8TF61 875 aa10.87□□□□□ -0.67
CCDC47-207ENST00000612558 ZNF594Q96JF6 807 aaPredicted RBP10.87□□□□□ -0.67
CCDC47-207ENST00000612558 CCDC8Q9H0W5 538 aaPredicted RBP10.87□□□□□ -0.67
CCDC47-207ENST00000612558 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 NTSR2O95665 410 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 ITGA6P23229 1130 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 TRAPPC3LQ5T215 181 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 USPL1Q5W0Q7 1092 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
CCDC47-207ENST00000612558 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 C4BP0C0L5 1744 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
CCDC47-207ENST00000612558 ZDHHC16Q969W1 377 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
CCDC47-207ENST00000612558 PUS3Q9BZE2 481 aaKnown RBP10.86□□□□□ -0.67
CCDC47-207ENST00000612558 GREM2Q9H772 168 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
CCDC47-207ENST00000612558 CEP126Q9P2H0 1117 aa10.86□□□□□ -0.67
CCDC47-207ENST00000612558 REC8O95072 547 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 HCLS1P14317 486 aaPredicted RBP10.85□□□□□ -0.67
CCDC47-207ENST00000612558 CHMLP26374 656 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 RFC4P35249 363 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 WNT2BQ93097 391 aa10.85□□□□□ -0.67
CCDC47-207ENST00000612558 TLR7Q9NYK1 1049 aaKnown RBP10.85□□□□□ -0.67
CCDC47-207ENST00000612558 DBNLQ9UJU6 430 aaKnown RBP10.85□□□□□ -0.67
CCDC47-207ENST00000612558 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-207ENST00000612558 PLSCR1O15162 318 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 EVI5O60447 810 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-207ENST00000612558 ATP5JP18859 108 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 CCDC152Q4G0S7 254 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 LDHAL6AQ6ZMR3 332 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 SETDB2Q96T68 719 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 NYXQ9GZU5 481 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 RGS17Q9UGC6 210 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-207ENST00000612558 SRP68Q9UHB9 627 aaKnown RBP10.84□□□□□ -0.67
CCDC47-207ENST00000612558 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 SCN7AQ01118 1682 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 AK9Q5TCS8 1911 aa10.84□□□□□ -0.67
CCDC47-207ENST00000612558 SLC10A5Q5PT55 438 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 AMIGO3Q86WK7 504 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 DBNDD2Q9BQY9 259 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 ESYT1Q9BSJ8 1104 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 USP26Q9BXU7 913 aa10.83□□□□□ -0.68
CCDC47-207ENST00000612558 RTL9Q8NET4 1388 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 PHF14O94880 888 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
CCDC47-207ENST00000612558 TIMM10P62072 90 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 TXNRD1Q16881 649 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 ERFEQ4G0M1 354 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 TPTE2Q6XPS3 522 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 BOLA2Q9H3K6 86 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 CNNM1Q9NRU3 951 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 EP400Q96L91 3159 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
CCDC47-207ENST00000612558 A0A1B0GUL7 405 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 APBA3O96018 575 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 SSFA2P28290 1259 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 SF3B3Q15393 1217 aaKnown RBP10.82□□□□□ -0.68
CCDC47-207ENST00000612558 METTL24Q5JXM2 366 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 POTEAQ6S8J7 498 aa10.82□□□□□ -0.68
CCDC47-207ENST00000612558 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
CCDC47-207ENST00000612558 DDX60Q8IY21 1712 aaKnown RBP10.81□□□□□ -0.68
CCDC47-207ENST00000612558 LAMB2P55268 1798 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 HIP1O00291 1037 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
CCDC47-207ENST00000612558 BECN1Q14457 450 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-207ENST00000612558 RUFY2Q8WXA3 655 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 ZNF609O15014 1411 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
CCDC47-207ENST00000612558 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms