RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 SP8Q8IXZ3 490 aa15.73■□□□□ 0.11
PRKN-210ENST00000612540 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
PRKN-210ENST00000612540 TLR7Q9NYK1 1049 aaKnown RBP15.73■□□□□ 0.11
PRKN-210ENST00000612540 NSFL1CQ9UNZ2 370 aaKnown RBP15.73■□□□□ 0.11
PRKN-210ENST00000612540 FER1L6Q2WGJ9 1857 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 SNAP23O00161 211 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 UFL1O94874 794 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 MX1P20591 662 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 TIMM10P62072 90 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 LPIN2Q92539 896 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 DBNDD2Q9BQY9 259 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
PRKN-210ENST00000612540 C21orf2O43822 256 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 ADORA1P30542 326 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 APLP1P51693 650 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 RASSF7Q02833 373 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 IFFO2Q5TF58 517 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 MPNDQ8N594 471 aa15.71■□□□□ 0.11
PRKN-210ENST00000612540 RBM46Q8TBY0 533 aaKnown RBP15.71■□□□□ 0.11
PRKN-210ENST00000612540 DBNLQ9UJU6 430 aaKnown RBP15.71■□□□□ 0.11
PRKN-210ENST00000612540 ZNF804BA4D1E1 1349 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 FGFR2P21802 821 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 PRELPP51888 382 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 UBE4AQ14139 1066 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 DPP8Q6V1X1 898 aaPredicted RBP15.7■□□□□ 0.1
PRKN-210ENST00000612540 PLEKHM2Q8IWE5 1019 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 XAGE2Q96GT9 111 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
PRKN-210ENST00000612540 ZC3H4Q9UPT8 1303 aaKnown RBP15.69■□□□□ 0.1
PRKN-210ENST00000612540 MYH13Q9UKX3 1938 aa15.69■□□□□ 0.1
PRKN-210ENST00000612540 PDE1AP54750 535 aa15.69■□□□□ 0.1
PRKN-210ENST00000612540 CCDC93Q567U6 631 aa15.69■□□□□ 0.1
PRKN-210ENST00000612540 TTC39AQ5SRH9 613 aa15.69■□□□□ 0.1
PRKN-210ENST00000612540 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
PRKN-210ENST00000612540 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
PRKN-210ENST00000612540 LMNB1P20700 586 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 CCDC158Q5M9N0 1113 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 CC2D2BQ6DHV5 1058 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 DNAJC5GQ8N7S2 189 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 RRAGCQ9HB90 399 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 PODXL2Q9NZ53 605 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 AK9Q5TCS8 1911 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
PRKN-210ENST00000612540 DUOX1Q9NRD9 1551 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 NFKBIEO00221 500 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 ERC2O15083 957 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 KLRK1P26718 216 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 VPS37DQ86XT2 251 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 TBC1D16Q8TBP0 767 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 C7orf43Q8WVR3 580 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 AOX1Q06278 1338 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 TTC41PQ6P2S7 1318 aa15.67■□□□□ 0.1
PRKN-210ENST00000612540 PHKA1P46020 1223 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 GYG1P46976 350 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 FSTL1Q12841 308 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 CAVIN4Q5BKX8 364 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 STAP2Q9UGK3 403 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
PRKN-210ENST00000612540 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
PRKN-210ENST00000612540 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
PRKN-210ENST00000612540 BCAMP50895 628 aa15.65■□□□□ 0.1
PRKN-210ENST00000612540 CCDC102BQ68D86 513 aa15.65■□□□□ 0.1
PRKN-210ENST00000612540 RTKN2Q8IZC4 609 aa15.65■□□□□ 0.1
PRKN-210ENST00000612540 EYA3Q99504 573 aa15.65■□□□□ 0.1
PRKN-210ENST00000612540 GNL3LQ9NVN8 582 aaKnown RBP15.65■□□□□ 0.1
PRKN-210ENST00000612540 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 GLTPD2A6NH11 291 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 G3V3G9 751 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 UQCRFS1P1P0C7P4 283 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 TTC22Q5TAA0 569 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 PI4K2BQ8TCG2 481 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
PRKN-210ENST00000612540 BOLA2Q9H3K6 86 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 OSBPL3Q9H4L5 887 aa15.64■□□□□ 0.09
PRKN-210ENST00000612540 IQSEC3Q9UPP2 1182 aaPredicted RBP15.64■□□□□ 0.09
PRKN-210ENST00000612540 FRAT2O75474 233 aaPredicted RBP15.63■□□□□ 0.09
PRKN-210ENST00000612540 MAP4K4O95819 1239 aaPredicted RBP15.63■□□□□ 0.09
PRKN-210ENST00000612540 ATP5JP18859 108 aa15.63■□□□□ 0.09
PRKN-210ENST00000612540 HIBADHP31937 336 aaKnown RBP15.63■□□□□ 0.09
PRKN-210ENST00000612540 HTRA3P83110 453 aa15.63■□□□□ 0.09
PRKN-210ENST00000612540 TXNRD3Q86VQ6 643 aa15.63■□□□□ 0.09
PRKN-210ENST00000612540 FAM84BQ96KN1 310 aaPredicted RBP15.63■□□□□ 0.09
PRKN-210ENST00000612540 ZC3H12CQ9C0D7 883 aaKnown RBP15.63■□□□□ 0.09
PRKN-210ENST00000612540 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
PRKN-210ENST00000612540 SNED1Q8TER0 1413 aa15.62■□□□□ 0.09
PRKN-210ENST00000612540 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
PRKN-210ENST00000612540 WASHC4Q2M389 1173 aa15.62■□□□□ 0.09
PRKN-210ENST00000612540 SNRKQ9NRH2 765 aa15.62■□□□□ 0.09
PRKN-210ENST00000612540 PPIP5K2O43314 1243 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms