RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
PVT1-221ENST00000612011 SNAP23O00161 211 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 UFL1O94874 794 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 GORABQ5T7V8 394 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
PVT1-221ENST00000612011 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
PVT1-221ENST00000612011 ZNF804BA4D1E1 1349 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 ERC2O15083 957 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 ATP2B4P23634 1241 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
PVT1-221ENST00000612011 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
PVT1-221ENST00000612011 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
PVT1-221ENST00000612011 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
PVT1-221ENST00000612011 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
PVT1-221ENST00000612011 MPNDQ8N594 471 aa12.4□□□□□ -0.42
PVT1-221ENST00000612011 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
PVT1-221ENST00000612011 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
PVT1-221ENST00000612011 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 WTIPA6NIX2 430 aaPredicted RBP12.39□□□□□ -0.43
PVT1-221ENST00000612011 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 C21orf2O43822 256 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
PVT1-221ENST00000612011 KLRK1P26718 216 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 PHKA1P46020 1223 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
PVT1-221ENST00000612011 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 TBC1D16Q8TBP0 767 aa12.39□□□□□ -0.43
PVT1-221ENST00000612011 GPR101Q96P66 508 aaPredicted RBP12.39□□□□□ -0.43
PVT1-221ENST00000612011 UQCRFS1P1P0C7P4 283 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 GSPT1P15170 499 aaKnown RBP12.38□□□□□ -0.43
PVT1-221ENST00000612011 ATP5JP18859 108 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 ARID4AP29374 1257 aaPredicted RBP12.38□□□□□ -0.43
PVT1-221ENST00000612011 GYG1P46976 350 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 CAVIN4Q5BKX8 364 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 C7orf43Q8WVR3 580 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
PVT1-221ENST00000612011 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 BCAMP50895 628 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 C15orf52Q6ZUT6 534 aaKnown RBP12.37□□□□□ -0.43
PVT1-221ENST00000612011 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
PVT1-221ENST00000612011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
PVT1-221ENST00000612011 EYA3Q99504 573 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 DNAJC2Q99543 621 aaKnown RBP12.37□□□□□ -0.43
PVT1-221ENST00000612011 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 COL1A1P02452 1464 aaPredicted RBP12.37□□□□□ -0.43
PVT1-221ENST00000612011 ADAMTSL1Q8N6G6 1762 aa12.37□□□□□ -0.43
PVT1-221ENST00000612011 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
PVT1-221ENST00000612011 MCAMP43121 646 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 FAM84BQ96KN1 310 aaPredicted RBP12.36□□□□□ -0.43
PVT1-221ENST00000612011 HAUS7Q99871 368 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
PVT1-221ENST00000612011 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
PVT1-221ENST00000612011 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
PVT1-221ENST00000612011 SCARF1Q14162 830 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
PVT1-221ENST00000612011 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
PVT1-221ENST00000612011 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
PVT1-221ENST00000612011 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
PVT1-221ENST00000612011 SDSP20132 328 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
PVT1-221ENST00000612011 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
PVT1-221ENST00000612011 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 COL4A5P29400 1685 aa12.34□□□□□ -0.43
PVT1-221ENST00000612011 G3V3G9 751 aa12.33□□□□□ -0.44
PVT1-221ENST00000612011 GOLIM4O00461 696 aa12.33□□□□□ -0.44
PVT1-221ENST00000612011 SEMA3EO15041 775 aa12.33□□□□□ -0.44
PVT1-221ENST00000612011 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms