RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 TRIM5Q9C035 493 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 CTNNA3Q9UI47 895 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 PA2G4Q9UQ80 394 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 TCIRG1Q13488 830 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 EPHA10Q5JZY3 1008 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 GJD4Q96KN9 370 aaPredicted RBP22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 NRBP1Q9UHY1 535 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 H7C1W4 665 aa22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 IL6STP40189 918 aaPredicted RBP22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 FERMT3Q86UX7 667 aa22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 CGNQ9P2M7 1197 aaKnown RBP22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 GOLGA6L4A6NEF3 574 aa22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 CASP7P55210 303 aa22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 CLSTN2Q9H4D0 955 aa22.45■■□□□ 1.18
SEMA3B-210ENST00000611067 CREB3L3Q68CJ9 461 aa22.44■■□□□ 1.18
SEMA3B-210ENST00000611067 ISCA1Q9BUE6 129 aa22.44■■□□□ 1.18
SEMA3B-210ENST00000611067 ECHDC1Q9NTX5 307 aa22.44■■□□□ 1.18
SEMA3B-210ENST00000611067 PSMA5P28066 241 aa22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 RABL6Q3YEC7 729 aaPredicted RBP22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 FAM173BQ6P4H8 233 aa22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 SPATA32Q96LK8 384 aa22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 RBM8AQ9Y5S9 174 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 CCDC112Q8NEF3 446 aa22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 EVI5LQ96CN4 794 aa22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 CICQ96RK0 1608 aaPredicted RBP22.43■■□□□ 1.18
SEMA3B-210ENST00000611067 HSP90AB3PQ58FF7 597 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 GPATCH3Q96I76 525 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 CCDC87Q9NVE4 849 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 CDC25BP30305 580 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 GABPB1Q06547 395 aaPredicted RBP22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 ANKRD1Q15327 319 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 MAP4K1Q92918 833 aa22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 DDX41Q9UJV9 622 aaKnown RBP22.42■■□□□ 1.18
SEMA3B-210ENST00000611067 CAVIN2O95810 425 aa22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 CRKLP46109 303 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 ZNF165P49910 485 aa22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 TRIM28Q13263 835 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 LEO1Q8WVC0 666 aaPredicted RBP22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 CLIP2Q9UDT6 1046 aa22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 DZIP3Q86Y13 1208 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 CACTINQ8WUQ7 758 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 SIL1Q9H173 461 aa22.41■■□□□ 1.18
SEMA3B-210ENST00000611067 TPD52L1Q16890 204 aaPredicted RBP22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 ALDH8A1Q9H2A2 487 aaPredicted RBP22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 ATRNO75882 1429 aa22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 HIP1O00291 1037 aa22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 KCNJ4P48050 445 aa22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
SEMA3B-210ENST00000611067 SLC27A2O14975 620 aa22.39■■□□□ 1.17
SEMA3B-210ENST00000611067 ITPK1Q13572 414 aa22.39■■□□□ 1.17
SEMA3B-210ENST00000611067 KLHDC4Q8TBB5 520 aa22.39■■□□□ 1.17
SEMA3B-210ENST00000611067 COPRSQ9NQ92 184 aa22.39■■□□□ 1.17
SEMA3B-210ENST00000611067 HLFQ16534 295 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 TAF3Q5VWG9 929 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 DNAJC25Q9H1X3 360 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 SNRKQ9NRH2 765 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 TFIP11Q9UBB9 837 aaKnown RBP22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 MORC2Q9Y6X9 1032 aaPredicted RBP22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 NR1I2O75469 434 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 FOXO4P98177 505 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 BLOC1S2Q6QNY1 142 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
SEMA3B-210ENST00000611067 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 CEP135Q66GS9 1140 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 NEMFO60524 1076 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 IGSF3O75054 1194 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 CCDC144BQ3MJ40 725 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 SARM1Q6SZW1 724 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 CCDC144CPQ8IYA2 1237 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 ZNF831Q5JPB2 1677 aa22.37■■□□□ 1.17
SEMA3B-210ENST00000611067 RREB1Q92766 1687 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 SASH1O94885 1247 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 PCCAP05165 728 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 RFX5P48382 616 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 BICD2Q8TD16 824 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 PGBD1Q96JS3 809 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 NUP98P52948 1817 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 RPS6KB1P23443 525 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 GPTP24298 496 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 RBM6P78332 1123 aaKnown RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 NAA30Q147X3 362 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 ZNF771Q7L3S4 317 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 LRRC8AQ8IWT6 810 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 FAM227BQ96M60 508 aa22.36■■□□□ 1.17
SEMA3B-210ENST00000611067 NMIQ13287 307 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-210ENST00000611067 AACSQ86V21 672 aa22.35■■□□□ 1.17
SEMA3B-210ENST00000611067 ZBTB38Q8NAP3 1195 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms