RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 FUCA2Q9BTY2 467 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
PABPC1-224ENST00000610907 ANKRD36CQ5JPF3 1778 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 H3BQV1 296 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 ZNF500O60304 480 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-224ENST00000610907 ITGA6P23229 1130 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 SCRN1Q12765 414 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 HLFQ16534 295 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 IMMTQ16891 758 aaKnown RBP12.31□□□□□ -0.44
PABPC1-224ENST00000610907 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 IFFO2Q5TF58 517 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
PABPC1-224ENST00000610907 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
PABPC1-224ENST00000610907 AHDC1Q5TGY3 1603 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-224ENST00000610907 M0R2C6 588 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 IRS4O14654 1257 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-224ENST00000610907 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 ADORA1P30542 326 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 RESTQ13127 1097 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 FERMT3Q86UX7 667 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-224ENST00000610907 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 DDX19AQ9NUU7 478 aaKnown RBP12.3□□□□□ -0.44
PABPC1-224ENST00000610907 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
PABPC1-224ENST00000610907 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 RIC1Q4ADV7 1423 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 JAK2O60674 1132 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 ZAP70P43403 619 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 WASHC4Q2M389 1173 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 NSUN7Q8NE18 718 aaKnown RBP12.3□□□□□ -0.44
PABPC1-224ENST00000610907 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
PABPC1-224ENST00000610907 MROH5Q6ZUA9 1318 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 MYH3P11055 1940 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 DHX16O60231 1041 aaKnown RBP12.29□□□□□ -0.44
PABPC1-224ENST00000610907 PDE8BO95263 885 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 PDIA3P30101 505 aaKnown RBP12.29□□□□□ -0.44
PABPC1-224ENST00000610907 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 DZIP3Q86Y13 1208 aaKnown RBP12.29□□□□□ -0.44
PABPC1-224ENST00000610907 VGLL2Q8N8G2 317 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 GREM2Q9H772 168 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
PABPC1-224ENST00000610907 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 KDM4AO75164 1064 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 OFD1O75665 1012 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 FGAP02671 866 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 GPTP24298 496 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 APOBRQ0VD83 1088 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 NUP98P52948 1817 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 ATRNO75882 1429 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 SALL1Q9NSC2 1324 aa12.28□□□□□ -0.44
PABPC1-224ENST00000610907 ZNF213O14771 459 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 CTDNEP1O95476 244 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 CAVIN2O95810 425 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 ADD2P35612 726 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 TERF1P54274 439 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 EIF5P55010 431 aaKnown RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 SCARF1Q14162 830 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 PARP10Q53GL7 1025 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 RBM43Q6ZSC3 357 aaKnown RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 NCOA7Q8NI08 942 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 LPIN2Q92539 896 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.44
PABPC1-224ENST00000610907 LRRC2Q9BYS8 371 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 RCOR1Q9UKL0 485 aa12.27□□□□□ -0.44
PABPC1-224ENST00000610907 MYH7P12883 1935 aa12.27□□□□□ -0.45
PABPC1-224ENST00000610907 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
PABPC1-224ENST00000610907 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-224ENST00000610907 GPAA1O43292 621 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 MCAMP43121 646 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
PABPC1-224ENST00000610907 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 CCDC85AQ96PX6 553 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-224ENST00000610907 CLSTN2Q9H4D0 955 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
PABPC1-224ENST00000610907 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
PABPC1-224ENST00000610907 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 AKAP11Q9UKA4 1901 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 FOXP2O15409 715 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
PABPC1-224ENST00000610907 TPM3P06753 285 aa12.26□□□□□ -0.45
PABPC1-224ENST00000610907 LIG1P18858 919 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms