RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 TMOD2Q9NZR1 351 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 AOX1Q06278 1338 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 PHACTR2O75167 634 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 METAP2P50579 478 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 ANKIB1Q9P2G1 1089 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 FAM76AQ8TAV0 307 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 MIPOL1Q8TD10 442 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 ATRIPQ8WXE1 791 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 BAG1Q99933 345 aaPredicted RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 EXOC5O00471 708 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 ICE2Q659A1 982 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 BRAPQ7Z569 592 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 JARID2Q92833 1246 aaPredicted RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 CARD6Q9BX69 1037 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 RMND1Q9NWS8 449 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 KLF18A0A0U1RQI7 1052 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 A6NNZ2 444 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 KRT86O43790 486 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 SNRPA1P09661 255 aaKnown RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 HAND2P61296 217 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 KRT83P78385 493 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 MSL1Q68DK7 614 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 B4GALNT4Q76KP1 1039 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 AKR1B10O60218 316 aa10.38□□□□□ -0.75
COL25A1-208ENST00000610288 KARSQ15046 597 aaKnown RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF444Q8N0Y2 327 aaPredicted RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 PUF60Q9UHX1 559 aaKnown RBP10.38□□□□□ -0.75
COL25A1-208ENST00000610288 INPP5BP32019 993 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF569Q5MCW4 686 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 SPATA24Q86W54 205 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 CRACR2BQ8N4Y2 399 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ELP1O95163 1332 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 TACC1O75410 805 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ALDH1L1O75891 902 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 GCKP35557 465 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 MATR3P43243 847 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 MCMDC2Q4G0Z9 681 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC121Q6ZUS5 278 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 TEX13AQ9BXU3 409 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 JRKLQ9Y4A0 524 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 RHOXF2BP0C7M4 288 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 HMGB2P26583 209 aaKnown RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 OTUD7AQ8TE49 926 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 C8orf37Q96NL8 207 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ALG1Q9BT22 464 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 TAOK3Q9H2K8 898 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC194A0A1B0GVG4 234 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 TRIM21P19474 475 aaKnown RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 NMIQ13287 307 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 AFAP1L1Q8TED9 768 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 LZTFL1Q9NQ48 299 aa10.37□□□□□ -0.75
COL25A1-208ENST00000610288 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-208ENST00000610288 DNA2P51530 1060 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 NLRP5P59047 1200 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 CATIPQ7Z7H3 387 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 MICU3Q86XE3 530 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 ZFYVE9O95405 1425 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 ARHGAP6O43182 974 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 CHMP4BP1P59074 171 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 TMEM67Q5HYA8 995 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC114Q96M63 670 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 LRRC2Q9BYS8 371 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 PTPDC1A2A3K4 754 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 PPP1R12BO60237 982 aaPredicted RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 GOLGA5Q8TBA6 731 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF215Q9UL58 517 aaPredicted RBP10.36□□□□□ -0.75
COL25A1-208ENST00000610288 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
COL25A1-208ENST00000610288 SGSM2O43147 1006 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 ZFYP08048 801 aaPredicted RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 PPP2R5AQ15172 486 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC144CPQ8IYA2 1237 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 PAF1Q8N7H5 531 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 TTC21AQ8NDW8 1320 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 MSH6P52701 1360 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 MARCKSP29966 332 aaPredicted RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 AMPD3Q01432 767 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 KIF5AQ12840 1032 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 IFI16Q16666 785 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 RAB11FIP4Q86YS3 637 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 RAB34Q9BZG1 259 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms