RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
CTSA-219ENST00000607841 LPIN2Q92539 896 aa17.65■□□□□ 0.42
CTSA-219ENST00000607841 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
CTSA-219ENST00000607841 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
CTSA-219ENST00000607841 SPEF2Q9C093 1822 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
CTSA-219ENST00000607841 SLC5A1P13866 664 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 CXCL9Q07325 125 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
CTSA-219ENST00000607841 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 RAD17O75943 681 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 FGFR2P21802 821 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 KLRK1P26718 216 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 ATP2B3Q16720 1220 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
CTSA-219ENST00000607841 COL4A5P29400 1685 aa17.62■□□□□ 0.41
CTSA-219ENST00000607841 HIBADHP31937 336 aaKnown RBP17.62■□□□□ 0.41
CTSA-219ENST00000607841 TFCP2Q12800 502 aa17.62■□□□□ 0.41
CTSA-219ENST00000607841 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
CTSA-219ENST00000607841 CD209Q9NNX6 404 aa17.62■□□□□ 0.41
CTSA-219ENST00000607841 IRS2Q9Y4H2 1338 aa17.62■□□□□ 0.41
CTSA-219ENST00000607841 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
CTSA-219ENST00000607841 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
CTSA-219ENST00000607841 C1QTNF8P60827 252 aa17.61■□□□□ 0.41
CTSA-219ENST00000607841 L3MBTL3Q96JM7 780 aaPredicted RBP17.61■□□□□ 0.41
CTSA-219ENST00000607841 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
CTSA-219ENST00000607841 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
CTSA-219ENST00000607841 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 SASH1O94885 1247 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 IL1R1P14778 569 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 VEGFAP15692 232 aaPredicted RBP17.6■□□□□ 0.41
CTSA-219ENST00000607841 GYG1P46976 350 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
CTSA-219ENST00000607841 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
CTSA-219ENST00000607841 CCDC88AQ3V6T2 1871 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 PSMD14O00487 310 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 VIL1P09327 827 aaKnown RBP17.59■□□□□ 0.41
CTSA-219ENST00000607841 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
CTSA-219ENST00000607841 STRIP1Q5VSL9 837 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 FBXO33Q7Z6M2 555 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 RRAGCQ9HB90 399 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 GPR108Q9NPR9 543 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 KCNQ5Q9NR82 932 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
CTSA-219ENST00000607841 A0A1B0GUL7 405 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 FRAT2O75474 233 aaPredicted RBP17.58■□□□□ 0.4
CTSA-219ENST00000607841 RPS12P25398 132 aaKnown RBP17.58■□□□□ 0.4
CTSA-219ENST00000607841 TIMM10P62072 90 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 FBXW7Q969H0 707 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 GNL3LQ9NVN8 582 aaKnown RBP17.58■□□□□ 0.4
CTSA-219ENST00000607841 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
CTSA-219ENST00000607841 BCAMP50895 628 aa17.57■□□□□ 0.4
CTSA-219ENST00000607841 GTF2IP78347 998 aa17.57■□□□□ 0.4
CTSA-219ENST00000607841 RSBN1LQ6PCB5 846 aaPredicted RBP17.57■□□□□ 0.4
CTSA-219ENST00000607841 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
CTSA-219ENST00000607841 DPF2Q92785 391 aa17.57■□□□□ 0.4
CTSA-219ENST00000607841 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
CTSA-219ENST00000607841 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
CTSA-219ENST00000607841 MYO3BQ8WXR4 1341 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
CTSA-219ENST00000607841 TNNI3KQ59H18 835 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
CTSA-219ENST00000607841 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 FPGT-TNNI3KV9GXZ4 949 aa17.56■□□□□ 0.4
CTSA-219ENST00000607841 SCNN1DP51172 638 aa17.55■□□□□ 0.4
CTSA-219ENST00000607841 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
CTSA-219ENST00000607841 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
CTSA-219ENST00000607841 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
CTSA-219ENST00000607841 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
CTSA-219ENST00000607841 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
CTSA-219ENST00000607841 POTECB2RU33 542 aa17.54■□□□□ 0.4
CTSA-219ENST00000607841 H7C1D1 291 aa17.54■□□□□ 0.4
CTSA-219ENST00000607841 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
CTSA-219ENST00000607841 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
CTSA-219ENST00000607841 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
CTSA-219ENST00000607841 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 FAM205AQ6ZU69 1335 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 APBB1O00213 710 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 KIF3CO14782 793 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 SEMA3EO15041 775 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 ZBTB22O15209 634 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 ADORA1P30542 326 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 EPHX2P34913 555 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 MMP14P50281 582 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 HDAC1Q13547 482 aaPredicted RBP17.53■□□□□ 0.4
CTSA-219ENST00000607841 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
CTSA-219ENST00000607841 TBC1D22AQ8WUA7 517 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms