RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 SHTN1A0MZ66 631 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
CUX1-220ENST00000607092 RTL5Q5HYW3 569 aaPredicted RBP8.09□□□□□ -1.11
CUX1-220ENST00000607092 STRIP1Q5VSL9 837 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 ARMC9Q7Z3E5 817 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 APOBEC3FQ8IUX4 373 aaKnown RBP8.09□□□□□ -1.11
CUX1-220ENST00000607092 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 CFHR5Q9BXR6 569 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 ANKRD2Q9GZV1 360 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 COA1Q9GZY4 146 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
CUX1-220ENST00000607092 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 LEMD3Q9Y2U8 911 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 PAPPA2Q9BXP8 1791 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 CEP290O15078 2479 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 AKAP11Q9UKA4 1901 aa8.09□□□□□ -1.11
CUX1-220ENST00000607092 EGFRP00533 1210 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 IGHMBP2P38935 993 aaKnown RBP8.08□□□□□ -1.12
CUX1-220ENST00000607092 TM4SF4P48230 202 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 FBXO46Q6PJ61 603 aaPredicted RBP8.08□□□□□ -1.12
CUX1-220ENST00000607092 GMLQ99445 158 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 MYD88Q99836 296 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
CUX1-220ENST00000607092 STK31Q9BXU1 1019 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 PPP2R3BQ9Y5P8 575 aa8.08□□□□□ -1.12
CUX1-220ENST00000607092 COL1A1P02452 1464 aaPredicted RBP8.07□□□□□ -1.12
CUX1-220ENST00000607092 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
CUX1-220ENST00000607092 FKTNO75072 461 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 CTSWP56202 376 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 SOX10P56693 466 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 ARHGEF6Q15052 776 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 KRT24Q2M2I5 525 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 INTS3Q68E01 1043 aaKnown RBP8.07□□□□□ -1.12
CUX1-220ENST00000607092 OTUD7BQ6GQQ9 843 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
CUX1-220ENST00000607092 MANSC4A6NHS7 340 aaPredicted RBP8.06□□□□□ -1.12
CUX1-220ENST00000607092 GPR25O00155 361 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 MYO1BO43795 1136 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 WDHD1O75717 1129 aaPredicted RBP8.06□□□□□ -1.12
CUX1-220ENST00000607092 ZBTB48P10074 688 aaPredicted RBP8.06□□□□□ -1.12
CUX1-220ENST00000607092 CCT4P50991 539 aaKnown RBP8.06□□□□□ -1.12
CUX1-220ENST00000607092 SUPT20HL1Q3ZLR7 823 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 DACT2Q5SW24 774 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 KSR2Q6VAB6 950 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 ZNF296Q8WUU4 475 aaPredicted RBP8.06□□□□□ -1.12
CUX1-220ENST00000607092 MPHOSPH8Q99549 860 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
CUX1-220ENST00000607092 POLR2AP24928 1970 aaKnown RBP8.05□□□□□ -1.12
CUX1-220ENST00000607092 UBE2Q2LH0YL09 131 aa8.05□□□□□ -1.12
CUX1-220ENST00000607092 WNT10BO00744 389 aa8.05□□□□□ -1.12
CUX1-220ENST00000607092 KCNJ4P48050 445 aa8.05□□□□□ -1.12
CUX1-220ENST00000607092 PHAXQ9H814 394 aaKnown RBP8.05□□□□□ -1.12
CUX1-220ENST00000607092 MINPP1Q9UNW1 487 aa8.05□□□□□ -1.12
CUX1-220ENST00000607092 ADAMTS8Q9UP79 889 aa8.05□□□□□ -1.12
CUX1-220ENST00000607092 ZNF804BA4D1E1 1349 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 PSME4Q14997 1843 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 TBC1D8O95759 1140 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 DLGAP5Q15398 846 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 NBPF9Q3BBW0 867 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 TTLL5Q6EMB2 1281 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 DLK2Q6UY11 383 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 MTMR14Q8NCE2 650 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 TTLL11Q8NHH1 800 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 ERO1AQ96HE7 468 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 MAP3K2Q9Y2U5 619 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 TAF1P21675 1872 aa8.04□□□□□ -1.12
CUX1-220ENST00000607092 ASTN2O75129 1339 aaPredicted RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 SCN9AQ15858 1988 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 ELL2O00472 640 aaPredicted RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 FKBP1AP62942 108 aaKnown RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 TNFAIP1Q13829 316 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 MAP3K11Q16584 847 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 LDLRAD1Q5T700 205 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 ZNF804AQ7Z570 1209 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 PLA2G12BQ9BX93 195 aa8.03□□□□□ -1.12
CUX1-220ENST00000607092 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
CUX1-220ENST00000607092 ANKRD18BA2A2Z9 1011 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 NEURL1BA8MQ27 555 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 H7C1W4 665 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 APAF1O14727 1248 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 DSG3P32926 999 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 CCDC27Q2M243 656 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 C15orf52Q6ZUT6 534 aaKnown RBP8.02□□□□□ -1.13
CUX1-220ENST00000607092 LINS1Q8NG48 757 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 ZNF428Q96B54 188 aa8.02□□□□□ -1.13
CUX1-220ENST00000607092 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms