RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 CNTNAP1P78357 1384 aa18.08■□□□□ 0.49
PKNOX1-210ENST00000607049 PLIN1O60240 522 aa18.08■□□□□ 0.48
PKNOX1-210ENST00000607049 HIRAP54198 1017 aaPredicted RBP18.08■□□□□ 0.48
PKNOX1-210ENST00000607049 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.48
PKNOX1-210ENST00000607049 BICC1Q9H694 974 aaKnown RBP18.08■□□□□ 0.48
PKNOX1-210ENST00000607049 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 TRAF5O00463 557 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 TAF5LO75529 589 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 CELF2O95319 508 aaKnown RBP18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 PAXIP1Q6ZW49 1069 aaPredicted RBP18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 KRT26Q7Z3Y9 468 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 HELBQ8NG08 1087 aaPredicted RBP18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 GLIS2Q9BZE0 524 aaPredicted RBP18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 HDAC9Q9UKV0 1011 aa18.07■□□□□ 0.48
PKNOX1-210ENST00000607049 ZNF609O15014 1411 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 MROH5Q6ZUA9 1318 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 WTIPA6NIX2 430 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 UBTFL1P0CB47 393 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 ECE1P42892 770 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 ZNF280AP59817 542 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 RABL6Q3YEC7 729 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 C15orf52Q6ZUT6 534 aaKnown RBP18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 ARHGAP45Q92619 1136 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 ZNF408Q9H9D4 720 aa18.06■□□□□ 0.48
PKNOX1-210ENST00000607049 RASSF10A6NK89 507 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 DACT2Q5SW24 774 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 USP48Q86UV5 1035 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 TXNRD3Q86VQ6 643 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 CD209Q9NNX6 404 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 MYOZ2Q9NPC6 264 aa18.05■□□□□ 0.48
PKNOX1-210ENST00000607049 GTF2IP78347 998 aa18.04■□□□□ 0.48
PKNOX1-210ENST00000607049 UBE4AQ14139 1066 aa18.04■□□□□ 0.48
PKNOX1-210ENST00000607049 AIDAQ96BJ3 306 aa18.04■□□□□ 0.48
PKNOX1-210ENST00000607049 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
PKNOX1-210ENST00000607049 GMLQ99445 158 aa18.04■□□□□ 0.48
PKNOX1-210ENST00000607049 SPEF2Q9C093 1822 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 VEGFBP49765 207 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 SCARF1Q14162 830 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 CST9Q5W186 159 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 GGA3Q9NZ52 723 aa18.03■□□□□ 0.48
PKNOX1-210ENST00000607049 EGFRP00533 1210 aa18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 KLRK1P26718 216 aa18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 ANKRD44Q8N8A2 993 aa18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 TLL2Q9Y6L7 1015 aa18.02■□□□□ 0.48
PKNOX1-210ENST00000607049 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
PKNOX1-210ENST00000607049 CAVIN4Q5BKX8 364 aa18.01■□□□□ 0.47
PKNOX1-210ENST00000607049 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
PKNOX1-210ENST00000607049 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
PKNOX1-210ENST00000607049 RIPOR2Q9Y4F9 1068 aa18.01■□□□□ 0.47
PKNOX1-210ENST00000607049 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
PKNOX1-210ENST00000607049 GNAI3P08754 354 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 IL1R1P14778 569 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 HIBADHP31937 336 aaKnown RBP18■□□□□ 0.47
PKNOX1-210ENST00000607049 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
PKNOX1-210ENST00000607049 GRM1Q13255 1194 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 ANGEL2Q5VTE6 544 aaKnown RBP18■□□□□ 0.47
PKNOX1-210ENST00000607049 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
PKNOX1-210ENST00000607049 PUS3Q9BZE2 481 aaKnown RBP18■□□□□ 0.47
PKNOX1-210ENST00000607049 PITPNM2Q9BZ72 1349 aa17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 SNAP23O00161 211 aa17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 SAPCD2Q86UD0 394 aa17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 CAPNS2Q96L46 248 aa17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 SCN9AQ15858 1988 aa17.99■□□□□ 0.47
PKNOX1-210ENST00000607049 ADM5C9JUS6 153 aa17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 SASH1O94885 1247 aa17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 PDE8BO95263 885 aa17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 MXD3Q9BW11 206 aa17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
PKNOX1-210ENST00000607049 EYA2O00167 538 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 MYO1BO43795 1136 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 HUNKP57058 714 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 DLGAP5Q15398 846 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
PKNOX1-210ENST00000607049 NF2P35240 595 aa17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 MAP2K2P36507 400 aa17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 PUM3Q15397 648 aaKnown RBP17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 CYP4F22Q6NT55 531 aa17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 APOBEC3FQ8IUX4 373 aaKnown RBP17.96■□□□□ 0.47
PKNOX1-210ENST00000607049 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.46
PKNOX1-210ENST00000607049 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms