RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 RETREG2Q8NC44 543 aa8.88□□□□□ -0.99
CSNK1A1-211ENST00000606826 RASSF4Q9H2L5 321 aa8.88□□□□□ -0.99
CSNK1A1-211ENST00000606826 CNTN3Q9P232 1028 aa8.88□□□□□ -0.99
CSNK1A1-211ENST00000606826 TXNRD3Q86VQ6 643 aa8.87□□□□□ -0.99
CSNK1A1-211ENST00000606826 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
CSNK1A1-211ENST00000606826 URB2Q14146 1524 aaKnown RBP8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 KIF4AO95239 1232 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 NPR3P17342 541 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 XKR5Q6UX68 686 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 CACTIN-AS1Q8N1I8 211 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 C1orf127Q8N9H9 656 aa8.86□□□□□ -0.99
CSNK1A1-211ENST00000606826 H3BRB1 525 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 CDC25BP30305 580 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 USP5P45974 858 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 SERPINB4P48594 390 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 SEMA6BQ9H3T3 888 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 TUT1Q9H6E5 874 aaKnown RBP8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 DNMBPQ6XZF7 1577 aa8.85□□□□□ -0.99
CSNK1A1-211ENST00000606826 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 CDC27P30260 824 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 EHHADHQ08426 723 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 PDE4CQ08493 712 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 TXNDC11Q6PKC3 985 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 IGF2-ASQ6U949 168 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 GLYCTKQ8IVS8 523 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 PBX4Q9BYU1 374 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 EGFL7Q9UHF1 273 aa8.84□□□□□ -0.99
CSNK1A1-211ENST00000606826 FZD6O60353 706 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 PHACTR2O75167 634 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 MAP4K3Q8IVH8 894 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 CEP120Q8N960 986 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
CSNK1A1-211ENST00000606826 TOPBP1Q92547 1522 aa8.83□□□□□ -1
CSNK1A1-211ENST00000606826 LINC01387J3KSC0 135 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 DLL1O00548 723 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 ICMTO60725 284 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 ACPPP15309 386 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 PTPRAP18433 802 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 SNX29Q8TEQ0 813 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 PMEPA1Q969W9 287 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 SALL4Q9UJQ4 1053 aa8.82□□□□□ -1
CSNK1A1-211ENST00000606826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.82□□□□□ -1
CSNK1A1-211ENST00000606826 TNFRSF21O75509 655 aa8.81□□□□□ -1
CSNK1A1-211ENST00000606826 IREB2P48200 963 aaKnown RBP8.81□□□□□ -1
CSNK1A1-211ENST00000606826 SETDB1Q15047 1291 aa8.81□□□□□ -1
CSNK1A1-211ENST00000606826 RSPO4Q2I0M5 234 aaPredicted RBP8.81□□□□□ -1
CSNK1A1-211ENST00000606826 FAM117BQ6P1L5 589 aa8.81□□□□□ -1
CSNK1A1-211ENST00000606826 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
CSNK1A1-211ENST00000606826 CHRDQ9H2X0 955 aa8.81□□□□□ -1
CSNK1A1-211ENST00000606826 FOXD3Q9UJU5 478 aaPredicted RBP8.81□□□□□ -1
CSNK1A1-211ENST00000606826 EREGO14944 169 aa8.8□□□□□ -1
CSNK1A1-211ENST00000606826 TP53INP1Q96A56 240 aa8.8□□□□□ -1
CSNK1A1-211ENST00000606826 POP1Q99575 1024 aaKnown RBP8.8□□□□□ -1
CSNK1A1-211ENST00000606826 MRPL18Q9H0U6 180 aaKnown RBP8.8□□□□□ -1
CSNK1A1-211ENST00000606826 SH2B1Q9NRF2 756 aaPredicted RBP8.8□□□□□ -1
CSNK1A1-211ENST00000606826 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
CSNK1A1-211ENST00000606826 TRPA1O75762 1119 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 EPHA1P21709 976 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 CABP4P57796 275 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 GJD3Q8N144 294 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 WDR97A6NE52 1622 aa8.79□□□□□ -1
CSNK1A1-211ENST00000606826 EDN3P14138 238 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 NOS3P29474 1203 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 ADAMTSL4Q6UY14 1074 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 CARD10Q9BWT7 1032 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 AKTIPQ9H8T0 292 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 DZANK1Q9NVP4 752 aa8.78□□□□□ -1
CSNK1A1-211ENST00000606826 PDE2AO00408 941 aaPredicted RBP8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 DYRK3O43781 588 aa8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 GALNT11Q8NCW6 608 aa8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 CCER1Q8TC90 406 aaPredicted RBP8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 HHIPQ96QV1 700 aa8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 OSMRQ99650 979 aa8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 AMOTL2Q9Y2J4 779 aa8.77□□□□□ -1.01
CSNK1A1-211ENST00000606826 FSCN2O14926 492 aa8.76□□□□□ -1.01
CSNK1A1-211ENST00000606826 NDUFB5O43674 189 aa8.76□□□□□ -1.01
CSNK1A1-211ENST00000606826 ALX3O95076 343 aa8.76□□□□□ -1.01
CSNK1A1-211ENST00000606826 CD68P34810 354 aaPredicted RBP8.76□□□□□ -1.01
CSNK1A1-211ENST00000606826 ADAM19Q9H013 955 aa8.76□□□□□ -1.01
CSNK1A1-211ENST00000606826 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 H3BRJ5 948 aa8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 NFKBIEO00221 500 aa8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 AGGF1Q8N302 714 aaeCLIP8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 MEGF10Q96KG7 1140 aa8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 ZKSCAN3Q9BRR0 538 aa8.75□□□□□ -1.01
CSNK1A1-211ENST00000606826 EIF4G3O43432 1585 aaKnown RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 H2AFB1P0C5Y9 115 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 H2AFB2P0C5Z0 115 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 FOXD4L6Q3SYB3 417 aaPredicted RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 FOXD4L3Q6VB84 417 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms