RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FOXO4P98177 505 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 BEND3Q5T5X7 828 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 TXNRD3Q86VQ6 643 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 C2orf69Q8N8R5 385 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 MPHOSPH8Q99549 860 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 COA1Q9GZY4 146 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 GBA2Q9HCG7 927 aaPredicted RBP9.71□□□□□ -0.86
CUX1-219ENST00000606749 MED23Q9ULK4 1368 aa9.71□□□□□ -0.86
CUX1-219ENST00000606749 DACT2Q5SW24 774 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 STRIP1Q5VSL9 837 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
CUX1-219ENST00000606749 PIAS4Q8N2W9 510 aaPredicted RBP9.7□□□□□ -0.86
CUX1-219ENST00000606749 ZIC5Q96T25 663 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 ANKRD2Q9GZV1 360 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 MYOZ2Q9NPC6 264 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 ZNF804BA4D1E1 1349 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 ZNF609O15014 1411 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 CACNA1FO60840 1977 aa9.7□□□□□ -0.86
CUX1-219ENST00000606749 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 FAM155AB1AL88 458 aaPredicted RBP9.69□□□□□ -0.86
CUX1-219ENST00000606749 MYH3P11055 1940 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
CUX1-219ENST00000606749 CHRNDQ07001 517 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 NOGQ13253 232 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 TTLL5Q6EMB2 1281 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 RGMBQ6NW40 437 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
CUX1-219ENST00000606749 PITPNM2Q9BZ72 1349 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 SNAP23O00161 211 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 CA12O43570 354 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 TAF5LO75529 589 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 KLRK1P26718 216 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
CUX1-219ENST00000606749 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 EPHA10Q5JZY3 1008 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 LMBR1LQ6UX01 489 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 OGFOD1Q8N543 542 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
CUX1-219ENST00000606749 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 CDCA5Q96FF9 252 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 CD209Q9NNX6 404 aa9.68□□□□□ -0.86
CUX1-219ENST00000606749 THSD7BQ9C0I4 1608 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 MYO3BQ8WXR4 1341 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 ZNF521Q96K83 1311 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 GRM8O00222 908 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 WNT10BO00744 389 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 ALDH1L1O75891 902 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 KCNJ4P48050 445 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 MMP14P50281 582 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 ZNF157P51786 506 aaPredicted RBP9.67□□□□□ -0.86
CUX1-219ENST00000606749 GTF2IP78347 998 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 C15orf52Q6ZUT6 534 aaKnown RBP9.67□□□□□ -0.86
CUX1-219ENST00000606749 SCAF8Q9UPN6 1271 aaKnown RBP9.67□□□□□ -0.86
CUX1-219ENST00000606749 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
CUX1-219ENST00000606749 PSME4Q14997 1843 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 SPEF2Q9C093 1822 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 KIF23Q02241 960 aaPredicted RBP9.66□□□□□ -0.86
CUX1-219ENST00000606749 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 PRAMEF18Q5VWM3 479 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 LDHAL6AQ6ZMR3 332 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
CUX1-219ENST00000606749 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
CUX1-219ENST00000606749 C9orf78Q9NZ63 289 aaPredicted RBP9.66□□□□□ -0.86
CUX1-219ENST00000606749 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 FKBP1BP68106 108 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 KIAA0825Q8IV33 1275 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 MRPL50Q8N5N7 158 aaKnown RBP9.65□□□□□ -0.86
CUX1-219ENST00000606749 CSRNP1Q96S65 589 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 SRCIN1Q9C0H9 1055 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
CUX1-219ENST00000606749 PLIN1O60240 522 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 NBPF7P0C2Y1 421 aaPredicted RBP9.64□□□□□ -0.87
CUX1-219ENST00000606749 IL1R1P14778 569 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 CERS5Q8N5B7 392 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 KAZALD1Q96I82 304 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 SUCLG2Q96I99 432 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 ZBED3Q96IU2 234 aaPredicted RBP9.64□□□□□ -0.87
CUX1-219ENST00000606749 CNNM1Q9NRU3 951 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 RNF186Q9NXI6 227 aa9.64□□□□□ -0.87
CUX1-219ENST00000606749 UTYO14607 1347 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 E9PSI1 815 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 UBE2Q2LH0YL09 131 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 SASH1O94885 1247 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 ZNF804AQ7Z570 1209 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 RASAL3Q86YV0 1011 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 PUS3Q9BZE2 481 aaKnown RBP9.63□□□□□ -0.87
CUX1-219ENST00000606749 SAGE1Q9NXZ1 904 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 RIPOR2Q9Y4F9 1068 aa9.63□□□□□ -0.87
CUX1-219ENST00000606749 ZNF646O15015 1829 aaPredicted RBP9.62□□□□□ -0.87
CUX1-219ENST00000606749 TRPA1O75762 1119 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms