RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
HLA-F-230ENST00000606273 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
HLA-F-230ENST00000606273 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
HLA-F-230ENST00000606273 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
HLA-F-230ENST00000606273 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
HLA-F-230ENST00000606273 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
HLA-F-230ENST00000606273 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
HLA-F-230ENST00000606273 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
HLA-F-230ENST00000606273 NR1I2O75469 434 aa16.32■□□□□ 0.2
HLA-F-230ENST00000606273 ZNF790Q6PG37 636 aa16.32■□□□□ 0.2
HLA-F-230ENST00000606273 NOGQ13253 232 aa16.31■□□□□ 0.2
HLA-F-230ENST00000606273 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
HLA-F-230ENST00000606273 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
HLA-F-230ENST00000606273 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
HLA-F-230ENST00000606273 CASP8AP2Q9UKL3 1982 aa16.3■□□□□ 0.2
HLA-F-230ENST00000606273 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
HLA-F-230ENST00000606273 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
HLA-F-230ENST00000606273 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
HLA-F-230ENST00000606273 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
HLA-F-230ENST00000606273 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 S1PR4O95977 384 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 HMOX1P09601 288 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
HLA-F-230ENST00000606273 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 PHOX2BQ99453 314 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 COL4A5P29400 1685 aa16.29■□□□□ 0.2
HLA-F-230ENST00000606273 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
HLA-F-230ENST00000606273 ADH1BP00325 375 aa16.28■□□□□ 0.2
HLA-F-230ENST00000606273 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
HLA-F-230ENST00000606273 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
HLA-F-230ENST00000606273 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
HLA-F-230ENST00000606273 CACNA1SQ13698 1873 aa16.28■□□□□ 0.2
HLA-F-230ENST00000606273 PDE4DIPQ5VU43 2346 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 NRG2O14511 850 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-230ENST00000606273 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-230ENST00000606273 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-230ENST00000606273 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
HLA-F-230ENST00000606273 SCUBE3Q8IX30 993 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 FMNL2Q96PY5 1086 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
HLA-F-230ENST00000606273 ZNF652Q9Y2D9 606 aa16.27■□□□□ 0.2
HLA-F-230ENST00000606273 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
HLA-F-230ENST00000606273 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
HLA-F-230ENST00000606273 CRY2Q49AN0 593 aa16.26■□□□□ 0.19
HLA-F-230ENST00000606273 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
HLA-F-230ENST00000606273 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
HLA-F-230ENST00000606273 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
HLA-F-230ENST00000606273 SLC19A1P41440 591 aa16.25■□□□□ 0.19
HLA-F-230ENST00000606273 HIRAP54198 1017 aaPredicted RBP16.25■□□□□ 0.19
HLA-F-230ENST00000606273 TEFQ10587 303 aa16.25■□□□□ 0.19
HLA-F-230ENST00000606273 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
HLA-F-230ENST00000606273 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
HLA-F-230ENST00000606273 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
HLA-F-230ENST00000606273 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 LCE2BO14633 110 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 KCNQ3O43525 872 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
HLA-F-230ENST00000606273 HUNKP57058 714 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 CXCL9Q07325 125 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 ANKLE1Q8NAG6 615 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 RNF186Q9NXI6 227 aa16.24■□□□□ 0.19
HLA-F-230ENST00000606273 TRPA1O75762 1119 aa16.23■□□□□ 0.19
HLA-F-230ENST00000606273 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
HLA-F-230ENST00000606273 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
HLA-F-230ENST00000606273 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
HLA-F-230ENST00000606273 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
HLA-F-230ENST00000606273 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
HLA-F-230ENST00000606273 CTU1Q7Z7A3 348 aaKnown RBP16.22■□□□□ 0.19
HLA-F-230ENST00000606273 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
HLA-F-230ENST00000606273 HLFQ16534 295 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 TRAF7Q6Q0C0 670 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 DLK2Q6UY11 383 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 SLC6A16Q9GZN6 736 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 ZNRF3Q9ULT6 936 aa16.21■□□□□ 0.19
HLA-F-230ENST00000606273 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
HLA-F-230ENST00000606273 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
HLA-F-230ENST00000606273 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
HLA-F-230ENST00000606273 HABP4Q5JVS0 413 aaKnown RBP16.2■□□□□ 0.18
HLA-F-230ENST00000606273 CCDC102AQ96A19 550 aa16.2■□□□□ 0.18
HLA-F-230ENST00000606273 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
HLA-F-230ENST00000606273 FUT2Q10981 343 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 AOC3Q16853 763 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 NBPF10Q6P3W6 841 aaKnown RBP16.19■□□□□ 0.18
HLA-F-230ENST00000606273 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 SULF1Q8IWU6 871 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
HLA-F-230ENST00000606273 CSRNP1Q96S65 589 aa16.19■□□□□ 0.18
HLA-F-230ENST00000606273 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
HLA-F-230ENST00000606273 MORN1Q5T089 497 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms