RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 CSPP1Q1MSJ5 1256 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 NECAB1Q8N987 351 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 SYAP1Q96A49 352 aaPredicted RBP23.59■■□□□ 1.37
MMP28-201ENST00000605424 UTP14AQ9BVJ6 771 aaKnown RBP23.59■■□□□ 1.37
MMP28-201ENST00000605424 MTMR6Q9Y217 621 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 ZSCAN25Q6NSZ9 544 aa23.58■■□□□ 1.37
MMP28-201ENST00000605424 CHAMP1Q96JM3 812 aa23.58■■□□□ 1.37
MMP28-201ENST00000605424 CTNNA3Q9UI47 895 aa23.58■■□□□ 1.37
MMP28-201ENST00000605424 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 TTF1Q15361 905 aaPredicted RBP23.57■■□□□ 1.36
MMP28-201ENST00000605424 ZNF772Q68DY9 489 aaPredicted RBP23.57■■□□□ 1.36
MMP28-201ENST00000605424 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
MMP28-201ENST00000605424 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.57■■□□□ 1.36
MMP28-201ENST00000605424 ITPK1Q13572 414 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 SUSD4Q5VX71 490 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 USP48Q86UV5 1035 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 APPBP2Q92624 585 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 PANK2Q9BZ23 570 aa23.57■■□□□ 1.36
MMP28-201ENST00000605424 ZAP70P43403 619 aa23.56■■□□□ 1.36
MMP28-201ENST00000605424 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
MMP28-201ENST00000605424 OSBP2Q969R2 916 aa23.56■■□□□ 1.36
MMP28-201ENST00000605424 RTL9Q8NET4 1388 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 UQCRFS1P1P0C7P4 283 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 LARP1BQ659C4 914 aaKnown RBP23.55■■□□□ 1.36
MMP28-201ENST00000605424 Q6ZUG5 572 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 TCEANC2Q96MN5 208 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 A0A0G2JS52 829 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 RGL2O15211 777 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 SCARF1Q14162 830 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 PUM3Q15397 648 aaKnown RBP23.55■■□□□ 1.36
MMP28-201ENST00000605424 LPIN2Q92539 896 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 GTF3C6Q969F1 213 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 CHMP4CQ96CF2 233 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 AGXT2Q9BYV1 514 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 TMEM63CQ9P1W3 806 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 ZNF652Q9Y2D9 606 aa23.55■■□□□ 1.36
MMP28-201ENST00000605424 M0R2C6 588 aa23.54■■□□□ 1.36
MMP28-201ENST00000605424 KLHL34Q8N239 644 aa23.54■■□□□ 1.36
MMP28-201ENST00000605424 ONECUT3O60422 494 aaPredicted RBP23.53■■□□□ 1.36
MMP28-201ENST00000605424 ARID4AP29374 1257 aaPredicted RBP23.53■■□□□ 1.36
MMP28-201ENST00000605424 WASHC4Q2M389 1173 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 CLEC4GQ6UXB4 293 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 STOX1Q6ZVD7 989 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 FBXL16Q8N461 479 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 MYH7P12883 1935 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 FGFR2P21802 821 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 MCAMP43121 646 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 EXOSC10Q01780 885 aaKnown RBP23.53■■□□□ 1.36
MMP28-201ENST00000605424 SLFNL1Q499Z3 407 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 LRSAM1Q6UWE0 723 aa23.53■■□□□ 1.36
MMP28-201ENST00000605424 LLPHQ9BRT6 129 aaKnown RBP23.53■■□□□ 1.36
MMP28-201ENST00000605424 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 COL5A3P25940 1745 aaPredicted RBP23.52■■□□□ 1.36
MMP28-201ENST00000605424 AKAP11Q9UKA4 1901 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 E7EWF7 191 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 PHF14O94880 888 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 CCDC152Q4G0S7 254 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 NSFL1CQ9UNZ2 370 aaKnown RBP23.52■■□□□ 1.36
MMP28-201ENST00000605424 ARAP2Q8WZ64 1704 aa23.52■■□□□ 1.36
MMP28-201ENST00000605424 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
MMP28-201ENST00000605424 UBE2HP62256 183 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 FGD1P98174 961 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
MMP28-201ENST00000605424 LAMB2P55268 1798 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 LAMA4Q16363 1823 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 NASPP49321 788 aaPredicted RBP23.51■■□□□ 1.35
MMP28-201ENST00000605424 FAM43AQ8N2R8 423 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 CNPY2Q9Y2B0 182 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 TCHHQ07283 1943 aa23.51■■□□□ 1.35
MMP28-201ENST00000605424 VPS37CA5D8V6 355 aaPredicted RBP23.5■■□□□ 1.35
MMP28-201ENST00000605424 PFKFB2O60825 505 aa23.5■■□□□ 1.35
MMP28-201ENST00000605424 NTSR2O95665 410 aa23.5■■□□□ 1.35
MMP28-201ENST00000605424 IMMTQ16891 758 aaKnown RBP23.5■■□□□ 1.35
MMP28-201ENST00000605424 CCDC102BQ68D86 513 aa23.5■■□□□ 1.35
MMP28-201ENST00000605424 ANP32BQ92688 251 aaKnown RBP23.5■■□□□ 1.35
MMP28-201ENST00000605424 MPHOSPH8Q99549 860 aa23.5■■□□□ 1.35
MMP28-201ENST00000605424 NIP7Q9Y221 180 aaKnown RBP eCLIP23.5■■□□□ 1.35
MMP28-201ENST00000605424 EP400Q96L91 3159 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 SLC5A1P13866 664 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
MMP28-201ENST00000605424 ADD2P35612 726 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
MMP28-201ENST00000605424 UBE3CQ15386 1083 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 FOXD4L6Q3SYB3 417 aaPredicted RBP23.49■■□□□ 1.35
MMP28-201ENST00000605424 FOXD4L3Q6VB84 417 aaPredicted RBP23.49■■□□□ 1.35
MMP28-201ENST00000605424 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 BRF1Q92994 677 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 GDPD2Q9HCC8 539 aa23.49■■□□□ 1.35
MMP28-201ENST00000605424 DDX60Q8IY21 1712 aaKnown RBP23.48■■□□□ 1.35
MMP28-201ENST00000605424 BCORQ6W2J9 1755 aa23.48■■□□□ 1.35
MMP28-201ENST00000605424 GADD45BO75293 160 aaPredicted RBP23.48■■□□□ 1.35
MMP28-201ENST00000605424 STK3Q13188 491 aa23.48■■□□□ 1.35
MMP28-201ENST00000605424 FAM182BQ5T319 152 aa23.48■■□□□ 1.35
MMP28-201ENST00000605424 KCNQ2O43526 872 aa23.47■■□□□ 1.35
MMP28-201ENST00000605424 LETM1O95202 739 aaPredicted RBP23.47■■□□□ 1.35
MMP28-201ENST00000605424 ZNF274Q96GC6 653 aaPredicted RBP23.47■■□□□ 1.35
MMP28-201ENST00000605424 IGHMBP2P38935 993 aaKnown RBP23.47■■□□□ 1.35
MMP28-201ENST00000605424 SMARCC2Q8TAQ2 1214 aa23.47■■□□□ 1.35
MMP28-201ENST00000605424 PUS7LQ9H0K6 701 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms