RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 HOMER2Q9NSB8 354 aa23.95■■□□□ 1.42
SH3D19-211ENST00000604030 EBAG9O00559 213 aa23.95■■□□□ 1.42
SH3D19-211ENST00000604030 CCDC129Q6ZRS4 1044 aa23.95■■□□□ 1.42
SH3D19-211ENST00000604030 CABP5Q9NP86 173 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 ATP5J2-PTCD1G3V325 749 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 BABAM1Q9NWV8 329 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 A6NNZ2 444 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 TUBB8Q3ZCM7 444 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 TSGA10Q9BZW7 698 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 PAG1Q9NWQ8 432 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
SH3D19-211ENST00000604030 AFMP43652 599 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 SREK1Q8WXA9 508 aaKnown RBP23.94■■□□□ 1.42
SH3D19-211ENST00000604030 TRERF1Q96PN7 1200 aa23.94■■□□□ 1.42
SH3D19-211ENST00000604030 RNF113AO15541 343 aaKnown RBP23.93■■□□□ 1.42
SH3D19-211ENST00000604030 SMAP1Q8IYB5 467 aaPredicted RBP23.93■■□□□ 1.42
SH3D19-211ENST00000604030 CAPN2P17655 700 aa23.93■■□□□ 1.42
SH3D19-211ENST00000604030 SPATA24Q86W54 205 aa23.93■■□□□ 1.42
SH3D19-211ENST00000604030 TICAM2Q86XR7 235 aa23.93■■□□□ 1.42
SH3D19-211ENST00000604030 CCDC42Q96M95 316 aa23.93■■□□□ 1.42
SH3D19-211ENST00000604030 TRIM14Q14142 442 aa23.93■■□□□ 1.42
SH3D19-211ENST00000604030 NUTM2AQ8IVF1 878 aaPredicted RBP23.93■■□□□ 1.42
SH3D19-211ENST00000604030 ZNF445P59923 1031 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 EXOC5O00471 708 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 KRT13P13646 458 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 PTGS1P23219 599 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 MYL5Q02045 173 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 RSPH14Q9UHP6 348 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 ELP1O95163 1332 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 FAM160A1Q05DH4 1040 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 LLPHQ9BRT6 129 aaKnown RBP23.92■■□□□ 1.42
SH3D19-211ENST00000604030 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
SH3D19-211ENST00000604030 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
SH3D19-211ENST00000604030 LMOD1P29536 600 aaPredicted RBP23.92■■□□□ 1.42
SH3D19-211ENST00000604030 CEP63Q96MT8 703 aa23.92■■□□□ 1.42
SH3D19-211ENST00000604030 VAV2P52735 878 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 FLT4P35916 1363 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 HDXQ7Z353 690 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 FBF1Q8TES7 1133 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 KIF4AO95239 1232 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 GPTP24298 496 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 KRT28Q7Z3Y7 464 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 XAGE3Q8WTP9 111 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 TSNARE1Q96NA8 513 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 SLC4A4Q9Y6R1 1079 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 PTPDC1A2A3K4 754 aa23.91■■□□□ 1.42
SH3D19-211ENST00000604030 ATP2A1O14983 1001 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 ASIC1P78348 528 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 FOXO3O43524 673 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 PPIP5K1Q6PFW1 1433 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 DHX37Q8IY37 1157 aaKnown RBP23.9■■□□□ 1.42
SH3D19-211ENST00000604030 C6orf50Q9HD87 102 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 A0A1W2PRG0 241 aa23.9■■□□□ 1.42
SH3D19-211ENST00000604030 PTPRKQ15262 1439 aa23.89■■□□□ 1.42
SH3D19-211ENST00000604030 SCLT1Q96NL6 688 aa23.89■■□□□ 1.42
SH3D19-211ENST00000604030 HELLSQ9NRZ9 838 aa23.89■■□□□ 1.42
SH3D19-211ENST00000604030 RAPGEF6Q8TEU7 1601 aa23.89■■□□□ 1.42
SH3D19-211ENST00000604030 IQUBQ8NA54 791 aa23.89■■□□□ 1.42
SH3D19-211ENST00000604030 CYP7A1P22680 504 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 KRT2P35908 639 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 TNNC1P63316 161 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 CCDC121Q6ZUS5 278 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 IFNKQ9P0W0 207 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 RLBP1P12271 317 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 GTF2A1P52655 376 aaPredicted RBP23.89■■□□□ 1.41
SH3D19-211ENST00000604030 ATRIPQ8WXE1 791 aa23.89■■□□□ 1.41
SH3D19-211ENST00000604030 MARCKSP29966 332 aaPredicted RBP23.88■■□□□ 1.41
SH3D19-211ENST00000604030 TESK2Q96S53 571 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 NAP1L4Q99733 375 aaKnown RBP23.88■■□□□ 1.41
SH3D19-211ENST00000604030 TSPY3P0CV98 308 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 TSPY8P0CW00 308 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 LUC7L2Q9Y383 392 aaKnown RBP23.88■■□□□ 1.41
SH3D19-211ENST00000604030 LMBR1LQ6UX01 489 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 MSL1Q68DK7 614 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 POLKQ9UBT6 870 aa23.88■■□□□ 1.41
SH3D19-211ENST00000604030 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
SH3D19-211ENST00000604030 COPS6Q7L5N1 327 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 PLCH2O75038 1416 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 DHX58Q96C10 678 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 IMPACTQ9P2X3 320 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 EIF4A2Q14240 407 aaKnown RBP23.87■■□□□ 1.41
SH3D19-211ENST00000604030 C16orf71Q8IYS4 520 aaPredicted RBP23.87■■□□□ 1.41
SH3D19-211ENST00000604030 SLC9C2Q5TAH2 1124 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 NEK11Q8NG66 645 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 LRRC2Q9BYS8 371 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 RBM28Q9NW13 759 aaKnown RBP23.87■■□□□ 1.41
SH3D19-211ENST00000604030 FBXO31Q5XUX0 539 aaPredicted RBP23.87■■□□□ 1.41
SH3D19-211ENST00000604030 TCEANC2Q96MN5 208 aa23.87■■□□□ 1.41
SH3D19-211ENST00000604030 ZMYM4Q5VZL5 1548 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 FERP16591 822 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 RAB11FIP4Q86YS3 637 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 OTUD6BQ8N6M0 293 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 KRT79Q5XKE5 535 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 SYT10Q6XYQ8 523 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 IQCGQ9H095 443 aaKnown RBP23.86■■□□□ 1.41
SH3D19-211ENST00000604030 AKR1B15C9JRZ8 316 aaPredicted RBP23.86■■□□□ 1.41
SH3D19-211ENST00000604030 VAT1LQ9HCJ6 419 aa23.86■■□□□ 1.41
SH3D19-211ENST00000604030 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms