RNA–Protein interactions for RNA: ENST00000602397.5

STRN4-224, Transcript of striatin 4, human

TSL 3

Gene STRN4, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-224	ENST00000602397	METTL24	Q5JXM2	366 aa		18.87	■□□□□ 0.61
STRN4-224	ENST00000602397	SIRT2	Q8IXJ6	389 aa		18.87	■□□□□ 0.61
STRN4-224	ENST00000602397	SIL1	Q9H173	461 aa		18.87	■□□□□ 0.61
STRN4-224	ENST00000602397	RAD17	O75943	681 aa		18.86	■□□□□ 0.61
STRN4-224	ENST00000602397	IL15	P40933	162 aa	Predicted RBP	18.86	■□□□□ 0.61
STRN4-224	ENST00000602397	PODN	Q7Z5L7	613 aa		18.86	■□□□□ 0.61
STRN4-224	ENST00000602397	COA1	Q9GZY4	146 aa		18.86	■□□□□ 0.61
STRN4-224	ENST00000602397	KCNJ4	P48050	445 aa		18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	CIAPIN1	Q6FI81	312 aa		18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	RRAGC	Q9HB90	399 aa		18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	NOP58	Q9Y2X3	529 aa	Known RBP	18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	SCN4A	P35499	1836 aa		18.85	■□□□□ 0.61
STRN4-224	ENST00000602397	ZNF609	O15014	1411 aa		18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	VIL1	P09327	827 aa	Known RBP	18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	SCNN1D	P51172	638 aa		18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	FAM84B	Q96KN1	310 aa	Predicted RBP	18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	CHMP4B	Q9H444	224 aa	Known RBP	18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	CD209	Q9NNX6	404 aa		18.84	■□□□□ 0.61
STRN4-224	ENST00000602397	PSMD14	O00487	310 aa		18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	IL1R1	P14778	569 aa		18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	VEGFA	P15692	232 aa	Predicted RBP	18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	TNIP1	Q15025	636 aa		18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	PUM3	Q15397	648 aa	Known RBP	18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	FBXO33	Q7Z6M2	555 aa		18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	CEP126	Q9P2H0	1117 aa		18.83	■□□□□ 0.6
STRN4-224	ENST00000602397	SASH1	O94885	1247 aa		18.82	■□□□□ 0.6
STRN4-224	ENST00000602397	GML	Q99445	158 aa		18.82	■□□□□ 0.6
STRN4-224	ENST00000602397	GJA3	Q9Y6H8	435 aa		18.82	■□□□□ 0.6
STRN4-224	ENST00000602397	LPIN2	Q92539	896 aa		18.81	■□□□□ 0.6
STRN4-224	ENST00000602397	USP17L3	A6NCW0	530 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	USP17L4	A6NCW7	530 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	GYG1	P46976	350 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	GMPS	P49915	693 aa	Predicted RBP	18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	TFCP2	Q12800	502 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	DACT2	Q5SW24	774 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	USP17L1	Q7RTZ2	530 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	TDRD7	Q8NHU6	1098 aa	Known RBP	18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	DPF2	Q92785	391 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	CRBN	Q96SW2	442 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	GPRC5D	Q9NZD1	345 aa		18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.8	■□□□□ 0.6
STRN4-224	ENST00000602397	ADAMTSL1	Q8N6G6	1762 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	IQCA1L	A6NCM1	817 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397		G3V3G9	751 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	ZBTB22	O15209	634 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	HIBADH	P31937	336 aa	Known RBP	18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	EPS15	P42566	896 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	ATP2B3	Q16720	1220 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	DCAF8	Q5TAQ9	597 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	STRIP1	Q5VSL9	837 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	ZNF804A	Q7Z570	1209 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	ARAP2	Q8WZ64	1704 aa		18.79	■□□□□ 0.6
STRN4-224	ENST00000602397	SURF6	O75683	361 aa	Known RBP	18.78	■□□□□ 0.6
STRN4-224	ENST00000602397	IFIT1	P09914	478 aa	Known RBP	18.78	■□□□□ 0.6
STRN4-224	ENST00000602397	RPS12	P25398	132 aa	Known RBP	18.78	■□□□□ 0.6
STRN4-224	ENST00000602397	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	4e-6	■□□□□ 8.8
STRN4-224	ENST00000602397	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.78	■□□□□ 0.6
STRN4-224	ENST00000602397	HACL1	Q9UJ83	578 aa		18.78	■□□□□ 0.6
STRN4-224	ENST00000602397	FAM205A	Q6ZU69	1335 aa		18.77	■□□□□ 0.6
STRN4-224	ENST00000602397	SHTN1	A0MZ66	631 aa		18.77	■□□□□ 0.6
STRN4-224	ENST00000602397	SLC5A1	P13866	664 aa		18.77	■□□□□ 0.6
STRN4-224	ENST00000602397	BCAM	P50895	628 aa		18.77	■□□□□ 0.6
STRN4-224	ENST00000602397	PCDHB15	Q9Y5E8	787 aa		18.77	■□□□□ 0.6
STRN4-224	ENST00000602397	TOMM70	O94826	608 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	EPHX2	P34913	555 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	TIMM10	P62072	90 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	TTLL5	Q6EMB2	1281 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	AGBL3	Q8NEM8	1001 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	MXD3	Q9BW11	206 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397	GPR108	Q9NPR9	543 aa		18.76	■□□□□ 0.59
STRN4-224	ENST00000602397		A0A1B0GUL7	405 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	POTEI	P0CG38	1075 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	POTEJ	P0CG39	1038 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	ADORA1	P30542	326 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	GTF2I	P78347	998 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	CERS5	Q8N5B7	392 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	CNOT7	Q9UIV1	285 aa	Known RBP	18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	EXOC6B	Q9Y2D4	811 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	AKAP2	Q9Y2D5	859 aa		18.75	■□□□□ 0.59
STRN4-224	ENST00000602397	HMMR	O75330	724 aa		18.74	■□□□□ 0.59
STRN4-224	ENST00000602397	ZNF280A	P59817	542 aa	Predicted RBP	18.74	■□□□□ 0.59
STRN4-224	ENST00000602397	FKBP1A	P62942	108 aa	Known RBP	18.74	■□□□□ 0.59
STRN4-224	ENST00000602397	CAVIN4	Q5BKX8	364 aa		18.74	■□□□□ 0.59
STRN4-224	ENST00000602397	RBM46	Q8TBY0	533 aa	Known RBP	18.74	■□□□□ 0.59
STRN4-224	ENST00000602397	LMOD1	P29536	600 aa	Predicted RBP	18.73	■□□□□ 0.59
STRN4-224	ENST00000602397	HIRA	P54198	1017 aa	Predicted RBP	18.73	■□□□□ 0.59
STRN4-224	ENST00000602397	MICALL2	Q8IY33	904 aa		18.73	■□□□□ 0.59
STRN4-224	ENST00000602397	ADARB2	Q9NS39	739 aa	Known RBP	18.73	■□□□□ 0.59
STRN4-224	ENST00000602397	COL1A1	P02452	1464 aa	Predicted RBP	18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	EGFR	P00533	1210 aa		18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	PHKA1	P46020	1223 aa		18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	TNNI3K	Q59H18	835 aa		18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	USP50	Q70EL3	339 aa	Predicted RBP	18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	PNMA8A	Q86V59	439 aa	Predicted RBP	18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	XAGE2	Q96GT9	111 aa		18.72	■□□□□ 0.59
STRN4-224	ENST00000602397	FPGT-TNNI3K	V9GXZ4	949 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms