RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SASH1O94885 1247 aa20.83■□□□□ 0.93
SSBP4-211ENST00000601614 PCCAP05165 728 aaPredicted RBP20.83■□□□□ 0.93
SSBP4-211ENST00000601614 ATP2B4P23634 1241 aa20.83■□□□□ 0.93
SSBP4-211ENST00000601614 PRKG1Q13976 671 aa20.83■□□□□ 0.93
SSBP4-211ENST00000601614 HABP4Q5JVS0 413 aaKnown RBP20.83■□□□□ 0.93
SSBP4-211ENST00000601614 SREBF2Q12772 1141 aa20.82■□□□□ 0.92
SSBP4-211ENST00000601614 ANKRD18AQ8IVF6 992 aa20.82■□□□□ 0.92
SSBP4-211ENST00000601614 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
SSBP4-211ENST00000601614 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
SSBP4-211ENST00000601614 SPRYD7Q5W111 196 aa20.81■□□□□ 0.92
SSBP4-211ENST00000601614 LDLRAD1Q5T700 205 aa20.8■□□□□ 0.92
SSBP4-211ENST00000601614 TXNRD3Q86VQ6 643 aa20.8■□□□□ 0.92
SSBP4-211ENST00000601614 CCDC191Q8NCU4 936 aa20.8■□□□□ 0.92
SSBP4-211ENST00000601614 CENPFP49454 3210 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 ECM29Q5VYK3 1845 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 NF2P35240 595 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 MBIPQ9NS73 344 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 TRIM17Q9Y577 477 aa20.79■□□□□ 0.92
SSBP4-211ENST00000601614 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 OTOP1Q7RTM1 612 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 ARMC9Q7Z3E5 817 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 FBXW7Q969H0 707 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
SSBP4-211ENST00000601614 ANGEL1Q9UNK9 670 aaKnown RBP20.78■□□□□ 0.92
SSBP4-211ENST00000601614 MINPP1Q9UNW1 487 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 BRCA2P51587 3418 aa20.78■□□□□ 0.92
SSBP4-211ENST00000601614 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
SSBP4-211ENST00000601614 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
SSBP4-211ENST00000601614 OGFOD1Q8N543 542 aa20.77■□□□□ 0.92
SSBP4-211ENST00000601614 ZBED3Q96IU2 234 aaPredicted RBP20.77■□□□□ 0.92
SSBP4-211ENST00000601614 KLRK1P26718 216 aa20.76■□□□□ 0.91
SSBP4-211ENST00000601614 CCT4P50991 539 aaKnown RBP20.76■□□□□ 0.91
SSBP4-211ENST00000601614 CTSWP56202 376 aa20.76■□□□□ 0.91
SSBP4-211ENST00000601614 IFNL1Q8IU54 200 aa20.76■□□□□ 0.91
SSBP4-211ENST00000601614 RUNDC1Q96C34 613 aa20.76■□□□□ 0.91
SSBP4-211ENST00000601614 MYO3BQ8WXR4 1341 aa20.76■□□□□ 0.91
SSBP4-211ENST00000601614 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
SSBP4-211ENST00000601614 CAP1Q01518 475 aa20.75■□□□□ 0.91
SSBP4-211ENST00000601614 KIAA0825Q8IV33 1275 aa20.75■□□□□ 0.91
SSBP4-211ENST00000601614 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
SSBP4-211ENST00000601614 CLMNQ96JQ2 1002 aa20.75■□□□□ 0.91
SSBP4-211ENST00000601614 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-211ENST00000601614 GREM2Q9H772 168 aa20.75■□□□□ 0.91
SSBP4-211ENST00000601614 BSDC1Q9NW68 430 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-211ENST00000601614 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-211ENST00000601614 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-211ENST00000601614 ALDH1A1P00352 501 aa20.74■□□□□ 0.91
SSBP4-211ENST00000601614 ZNF853P0CG23 659 aa20.74■□□□□ 0.91
SSBP4-211ENST00000601614 APOBEC3FQ8IUX4 373 aaKnown RBP20.74■□□□□ 0.91
SSBP4-211ENST00000601614 CDC5LQ99459 802 aaKnown RBP20.74■□□□□ 0.91
SSBP4-211ENST00000601614 COA1Q9GZY4 146 aa20.74■□□□□ 0.91
SSBP4-211ENST00000601614 OTOFQ9HC10 1997 aa20.74■□□□□ 0.91
SSBP4-211ENST00000601614 A0A1B0GUL6 1792 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 MANSC4A6NHS7 340 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-211ENST00000601614 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 EN2P19622 333 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-211ENST00000601614 FXR1P51114 621 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSBP4-211ENST00000601614 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
SSBP4-211ENST00000601614 TTLL5Q6EMB2 1281 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 WNK4Q96J92 1243 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 PCDHAC2Q9Y5I4 1007 aa20.72■□□□□ 0.91
SSBP4-211ENST00000601614 COL1A1P02452 1464 aaPredicted RBP20.71■□□□□ 0.91
SSBP4-211ENST00000601614 RALBP1Q15311 655 aa20.71■□□□□ 0.91
SSBP4-211ENST00000601614 CD99L2Q8TCZ2 262 aa20.71■□□□□ 0.91
SSBP4-211ENST00000601614 SLC10A4Q96EP9 437 aa20.71■□□□□ 0.91
SSBP4-211ENST00000601614 DEFB129Q9H1M3 183 aa20.71■□□□□ 0.91
SSBP4-211ENST00000601614 GJA5P36382 358 aa20.7■□□□□ 0.9
SSBP4-211ENST00000601614 GTF2IP78347 998 aa20.7■□□□□ 0.9
SSBP4-211ENST00000601614 C8orf58Q8NAV2 365 aa20.7■□□□□ 0.9
SSBP4-211ENST00000601614 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
SSBP4-211ENST00000601614 MAP3K2Q9Y2U5 619 aa20.7■□□□□ 0.9
SSBP4-211ENST00000601614 ZBTB48P10074 688 aaPredicted RBP20.69■□□□□ 0.9
SSBP4-211ENST00000601614 INHBEP58166 350 aa20.69■□□□□ 0.9
SSBP4-211ENST00000601614 CRHR2Q13324 411 aa20.69■□□□□ 0.9
SSBP4-211ENST00000601614 CERS5Q8N5B7 392 aa20.69■□□□□ 0.9
SSBP4-211ENST00000601614 ARMC5Q96C12 935 aa20.69■□□□□ 0.9
SSBP4-211ENST00000601614 AOX1Q06278 1338 aa20.69■□□□□ 0.9
SSBP4-211ENST00000601614 MMP14P50281 582 aa20.68■□□□□ 0.9
SSBP4-211ENST00000601614 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
SSBP4-211ENST00000601614 ZNF804BA4D1E1 1349 aa20.68■□□□□ 0.9
SSBP4-211ENST00000601614 CEP290O15078 2479 aa20.67■□□□□ 0.9
SSBP4-211ENST00000601614 CWF19L2Q2TBE0 894 aaKnown RBP20.67■□□□□ 0.9
SSBP4-211ENST00000601614 ERO1AQ96HE7 468 aa20.67■□□□□ 0.9
SSBP4-211ENST00000601614 PTPN18Q99952 460 aa20.67■□□□□ 0.9
SSBP4-211ENST00000601614 ZSWIM8A7E2V4 1837 aa20.67■□□□□ 0.9
SSBP4-211ENST00000601614 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
SSBP4-211ENST00000601614 IRS2Q9Y4H2 1338 aa20.66■□□□□ 0.9
SSBP4-211ENST00000601614 TRIOBPQ9H2D6 2365 aa20.66■□□□□ 0.9
SSBP4-211ENST00000601614 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
SSBP4-211ENST00000601614 CLRN2A0PK11 232 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 PI4KAP2A4QPH2 592 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 SNAP23O00161 211 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 DDX58O95786 925 aaKnown RBP20.65■□□□□ 0.9
SSBP4-211ENST00000601614 DLGAP5Q15398 846 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 NBPF12Q5TAG4 269 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-211ENST00000601614 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 EFCC1Q9HA90 598 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms