RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 WDR33Q9C0J8 1336 aaKnown RBP28.69■■■□□ 2.18
SSBP4-209ENST00000601357 CELF2O95319 508 aaKnown RBP28.69■■■□□ 2.18
SSBP4-209ENST00000601357 SSH1Q8WYL5 1049 aa28.69■■■□□ 2.18
SSBP4-209ENST00000601357 POLR2AP24928 1970 aaKnown RBP28.69■■■□□ 2.18
SSBP4-209ENST00000601357 UTYO14607 1347 aa28.69■■■□□ 2.18
SSBP4-209ENST00000601357 KLRK1P26718 216 aa28.68■■■□□ 2.18
SSBP4-209ENST00000601357 RBM26Q5T8P6 1007 aaKnown RBP28.68■■■□□ 2.18
SSBP4-209ENST00000601357 IRS2Q9Y4H2 1338 aa28.68■■■□□ 2.18
SSBP4-209ENST00000601357 SAPCD2Q86UD0 394 aa28.67■■■□□ 2.18
SSBP4-209ENST00000601357 USP48Q86UV5 1035 aa28.67■■■□□ 2.18
SSBP4-209ENST00000601357 KAZALD1Q96I82 304 aa28.67■■■□□ 2.18
SSBP4-209ENST00000601357 CHMP3Q9Y3E7 222 aa28.67■■■□□ 2.18
SSBP4-209ENST00000601357 NBPF7P0C2Y1 421 aaPredicted RBP28.66■■■□□ 2.18
SSBP4-209ENST00000601357 DACT2Q5SW24 774 aa28.66■■■□□ 2.18
SSBP4-209ENST00000601357 USP17L8P0C7I0 530 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 CCDC57Q2TAC2 916 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 ALDH1L2Q3SY69 923 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 STRIP1Q5VSL9 837 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 KRT26Q7Z3Y9 468 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 CAPNS2Q96L46 248 aa28.65■■■□□ 2.18
SSBP4-209ENST00000601357 DLK2Q6UY11 383 aa28.64■■■□□ 2.18
SSBP4-209ENST00000601357 C15orf52Q6ZUT6 534 aaKnown RBP28.64■■■□□ 2.18
SSBP4-209ENST00000601357 DCPSQ96C86 337 aaKnown RBP28.64■■■□□ 2.18
SSBP4-209ENST00000601357 SUCLG2Q96I99 432 aa28.64■■■□□ 2.18
SSBP4-209ENST00000601357 HHIPL1Q96JK4 782 aa28.64■■■□□ 2.18
SSBP4-209ENST00000601357 WBP1LQ9NX94 342 aa28.64■■■□□ 2.18
SSBP4-209ENST00000601357 ASTN2O75129 1339 aaPredicted RBP28.64■■■□□ 2.17
SSBP4-209ENST00000601357 FOXN1O15353 648 aa28.63■■■□□ 2.17
SSBP4-209ENST00000601357 ECE1P42892 770 aa28.63■■■□□ 2.17
SSBP4-209ENST00000601357 CYP4F22Q6NT55 531 aa28.63■■■□□ 2.17
SSBP4-209ENST00000601357 ZNF594Q96JF6 807 aaPredicted RBP28.63■■■□□ 2.17
SSBP4-209ENST00000601357 MYOZ2Q9NPC6 264 aa28.63■■■□□ 2.17
SSBP4-209ENST00000601357 GGA3Q9NZ52 723 aa28.63■■■□□ 2.17
SSBP4-209ENST00000601357 ADM5C9JUS6 153 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 SNAP23O00161 211 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 TAF5LO75529 589 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 KCNJ4P48050 445 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 HELBQ8NG08 1087 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-209ENST00000601357 MXD3Q9BW11 206 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 ZNF408Q9H9D4 720 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 MYO3BQ8WXR4 1341 aa28.62■■■□□ 2.17
SSBP4-209ENST00000601357 LDHAL6AQ6ZMR3 332 aa28.61■■■□□ 2.17
SSBP4-209ENST00000601357 SCARF1Q14162 830 aa28.6■■■□□ 2.17
SSBP4-209ENST00000601357 RABL6Q3YEC7 729 aaPredicted RBP28.6■■■□□ 2.17
SSBP4-209ENST00000601357 CT47B1P0C2W7 299 aaPredicted RBP28.59■■■□□ 2.17
SSBP4-209ENST00000601357 CD209Q9NNX6 404 aa28.59■■■□□ 2.17
SSBP4-209ENST00000601357 MAP2K1Q02750 393 aaPredicted RBP28.58■■■□□ 2.17
SSBP4-209ENST00000601357 TAF7LQ5H9L4 462 aa28.58■■■□□ 2.17
SSBP4-209ENST00000601357 TTLL5Q6EMB2 1281 aa28.58■■■□□ 2.17
SSBP4-209ENST00000601357 PAXIP1Q6ZW49 1069 aaPredicted RBP28.58■■■□□ 2.17
SSBP4-209ENST00000601357 BICC1Q9H694 974 aaKnown RBP28.58■■■□□ 2.17
SSBP4-209ENST00000601357 ANGEL2Q5VTE6 544 aaKnown RBP28.57■■■□□ 2.16
SSBP4-209ENST00000601357 SULF1Q8IWU6 871 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 FBXW7Q969H0 707 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 AIDAQ96BJ3 306 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 CNNM1Q9NRU3 951 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 SMC4Q9NTJ3 1288 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 PITPNM2Q9BZ72 1349 aa28.57■■■□□ 2.16
SSBP4-209ENST00000601357 MMP14P50281 582 aa28.56■■■□□ 2.16
SSBP4-209ENST00000601357 ANKRD44Q8N8A2 993 aa28.56■■■□□ 2.16
SSBP4-209ENST00000601357 USP44Q9H0E7 712 aa28.56■■■□□ 2.16
SSBP4-209ENST00000601357 CTCFP49711 727 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-209ENST00000601357 GTF2IP78347 998 aa28.55■■■□□ 2.16
SSBP4-209ENST00000601357 OGFOD1Q8N543 542 aa28.55■■■□□ 2.16
SSBP4-209ENST00000601357 IL1R1P14778 569 aa28.54■■■□□ 2.16
SSBP4-209ENST00000601357 MAP2K2P36507 400 aa28.54■■■□□ 2.16
SSBP4-209ENST00000601357 GRM1Q13255 1194 aa28.54■■■□□ 2.16
SSBP4-209ENST00000601357 BRPF1P55201 1214 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-209ENST00000601357 NBPF9Q3BBW0 867 aa28.53■■■□□ 2.16
SSBP4-209ENST00000601357 ZNF804AQ7Z570 1209 aa28.53■■■□□ 2.16
SSBP4-209ENST00000601357 CDCA5Q96FF9 252 aa28.53■■■□□ 2.16
SSBP4-209ENST00000601357 PUS3Q9BZE2 481 aaKnown RBP28.53■■■□□ 2.16
SSBP4-209ENST00000601357 GBA2Q9HCG7 927 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-209ENST00000601357 PRDM10Q9NQV6 1147 aa28.53■■■□□ 2.16
SSBP4-209ENST00000601357 RIPOR2Q9Y4F9 1068 aa28.53■■■□□ 2.16
SSBP4-209ENST00000601357 AOC2O75106 756 aa28.52■■■□□ 2.16
SSBP4-209ENST00000601357 HUNKP57058 714 aa28.52■■■□□ 2.16
SSBP4-209ENST00000601357 TNS4Q8IZW8 715 aa28.52■■■□□ 2.16
SSBP4-209ENST00000601357 WNT10BO00744 389 aa28.51■■■□□ 2.15
SSBP4-209ENST00000601357 PLIN1O60240 522 aa28.51■■■□□ 2.15
SSBP4-209ENST00000601357 KIAA0825Q8IV33 1275 aa28.51■■■□□ 2.15
SSBP4-209ENST00000601357 CERS5Q8N5B7 392 aa28.51■■■□□ 2.15
SSBP4-209ENST00000601357 UBE4AQ14139 1066 aa28.5■■■□□ 2.15
SSBP4-209ENST00000601357 C2orf69Q8N8R5 385 aa28.5■■■□□ 2.15
SSBP4-209ENST00000601357 MROH5Q6ZUA9 1318 aa28.49■■■□□ 2.15
SSBP4-209ENST00000601357 HSPA8P11142 646 aaKnown RBP28.49■■■□□ 2.15
SSBP4-209ENST00000601357 ZBED3Q96IU2 234 aaPredicted RBP28.49■■■□□ 2.15
SSBP4-209ENST00000601357 FKBP1AP62942 108 aaKnown RBP28.48■■■□□ 2.15
SSBP4-209ENST00000601357 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
SSBP4-209ENST00000601357 FAM155AB1AL88 458 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-209ENST00000601357 LBX1P52954 281 aa28.47■■■□□ 2.15
SSBP4-209ENST00000601357 HDAC9Q9UKV0 1011 aa28.47■■■□□ 2.15
SSBP4-209ENST00000601357 PAPPA2Q9BXP8 1791 aa28.47■■■□□ 2.15
SSBP4-209ENST00000601357 SASH1O94885 1247 aa28.46■■■□□ 2.15
SSBP4-209ENST00000601357 RARSP54136 660 aaKnown RBP28.46■■■□□ 2.15
SSBP4-209ENST00000601357 LRRC24Q50LG9 513 aa28.46■■■□□ 2.15
SSBP4-209ENST00000601357 RGMBQ6NW40 437 aa28.46■■■□□ 2.15
SSBP4-209ENST00000601357 SCAF8Q9UPN6 1271 aaKnown RBP28.46■■■□□ 2.15
SSBP4-209ENST00000601357 NOGQ13253 232 aa28.45■■■□□ 2.14
SSBP4-209ENST00000601357 VGLL2Q8N8G2 317 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms