RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PDE4DIPQ5VU43 2346 aa21.66■■□□□ 1.06
USE1-208ENST00000600970 WNT10BO00744 389 aa21.65■■□□□ 1.06
USE1-208ENST00000600970 CTSWP56202 376 aa21.65■■□□□ 1.06
USE1-208ENST00000600970 TTLL12Q14166 644 aaPredicted RBP21.65■■□□□ 1.06
USE1-208ENST00000600970 DACT2Q5SW24 774 aa21.65■■□□□ 1.06
USE1-208ENST00000600970 MINPP1Q9UNW1 487 aa21.65■■□□□ 1.06
USE1-208ENST00000600970 DDX58O95786 925 aaKnown RBP21.64■■□□□ 1.05
USE1-208ENST00000600970 GNAI1P63096 354 aa21.64■■□□□ 1.05
USE1-208ENST00000600970 OGFOD1Q8N543 542 aa21.64■■□□□ 1.05
USE1-208ENST00000600970 C8orf58Q8NAV2 365 aa21.64■■□□□ 1.05
USE1-208ENST00000600970 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.05
USE1-208ENST00000600970 BSDC1Q9NW68 430 aaPredicted RBP21.64■■□□□ 1.05
USE1-208ENST00000600970 GPR25O00155 361 aa21.63■■□□□ 1.05
USE1-208ENST00000600970 CCT4P50991 539 aaKnown RBP21.63■■□□□ 1.05
USE1-208ENST00000600970 MKRN3Q13064 507 aaKnown RBP21.63■■□□□ 1.05
USE1-208ENST00000600970 DDX10Q13206 875 aaKnown RBP21.63■■□□□ 1.05
USE1-208ENST00000600970 NOM1Q5C9Z4 860 aaKnown RBP21.63■■□□□ 1.05
USE1-208ENST00000600970 FBXW7Q969H0 707 aa21.63■■□□□ 1.05
USE1-208ENST00000600970 MAP3K2Q9Y2U5 619 aa21.63■■□□□ 1.05
USE1-208ENST00000600970 MYO3BQ8WXR4 1341 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 IGKV5-2P06315 115 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 NF2P35240 595 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 STRIP1Q5VSL9 837 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 CCDC30Q5VVM6 783 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 GREM2Q9H772 168 aa21.62■■□□□ 1.05
USE1-208ENST00000600970 APAF1O14727 1248 aa21.61■■□□□ 1.05
USE1-208ENST00000600970 SASH1O94885 1247 aa21.61■■□□□ 1.05
USE1-208ENST00000600970 TXNRD3Q86VQ6 643 aa21.61■■□□□ 1.05
USE1-208ENST00000600970 COA1Q9GZY4 146 aa21.61■■□□□ 1.05
USE1-208ENST00000600970 PTPN12Q05209 780 aaKnown RBP21.6■■□□□ 1.05
USE1-208ENST00000600970 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
USE1-208ENST00000600970 FBXO46Q6PJ61 603 aaPredicted RBP21.6■■□□□ 1.05
USE1-208ENST00000600970 SREBF2Q12772 1141 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 PRKG1Q13976 671 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 KSR2Q6VAB6 950 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 ARMC9Q7Z3E5 817 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 CFHR5Q9BXR6 569 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 R3HDMLQ9H3Y0 253 aa21.59■■□□□ 1.05
USE1-208ENST00000600970 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 MMP14P50281 582 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 TTLL5Q6EMB2 1281 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 TSPYL6Q8N831 410 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 CHMP4AQ9BY43 222 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 LEMD3Q9Y2U8 911 aa21.58■■□□□ 1.05
USE1-208ENST00000600970 FKTNO75072 461 aa21.57■■□□□ 1.04
USE1-208ENST00000600970 APOBEC3FQ8IUX4 373 aaKnown RBP21.57■■□□□ 1.04
USE1-208ENST00000600970 CWF19L2Q2TBE0 894 aaKnown RBP21.56■■□□□ 1.04
USE1-208ENST00000600970 LDLRAD1Q5T700 205 aa21.56■■□□□ 1.04
USE1-208ENST00000600970 KIAA0825Q8IV33 1275 aa21.56■■□□□ 1.04
USE1-208ENST00000600970 ZBED3Q96IU2 234 aaPredicted RBP21.56■■□□□ 1.04
USE1-208ENST00000600970 ZNF804BA4D1E1 1349 aa21.55■■□□□ 1.04
USE1-208ENST00000600970 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
USE1-208ENST00000600970 KLRK1P26718 216 aa21.55■■□□□ 1.04
USE1-208ENST00000600970 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
USE1-208ENST00000600970 NEXNQ0ZGT2 675 aa21.55■■□□□ 1.04
USE1-208ENST00000600970 SPRYD7Q5W111 196 aa21.55■■□□□ 1.04
USE1-208ENST00000600970 ANGEL1Q9UNK9 670 aaKnown RBP21.55■■□□□ 1.04
USE1-208ENST00000600970 LAMB1P07942 1786 aa21.54■■□□□ 1.04
USE1-208ENST00000600970 H7C1W4 665 aa21.54■■□□□ 1.04
USE1-208ENST00000600970 FZD1Q9UP38 647 aa21.54■■□□□ 1.04
USE1-208ENST00000600970 ECM29Q5VYK3 1845 aa21.54■■□□□ 1.04
USE1-208ENST00000600970 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
USE1-208ENST00000600970 GTF2IP78347 998 aa21.53■■□□□ 1.04
USE1-208ENST00000600970 UBE3BQ7Z3V4 1068 aa21.53■■□□□ 1.04
USE1-208ENST00000600970 ANKRD2Q9GZV1 360 aa21.53■■□□□ 1.04
USE1-208ENST00000600970 ALDH1A1P00352 501 aa21.52■■□□□ 1.04
USE1-208ENST00000600970 ITGA6P23229 1130 aa21.52■■□□□ 1.04
USE1-208ENST00000600970 G2E3Q7L622 706 aa21.51■■□□□ 1.03
USE1-208ENST00000600970 MPHOSPH8Q99549 860 aa21.51■■□□□ 1.03
USE1-208ENST00000600970 PLA2G12BQ9BX93 195 aa21.51■■□□□ 1.03
USE1-208ENST00000600970 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
USE1-208ENST00000600970 DEFB129Q9H1M3 183 aa21.51■■□□□ 1.03
USE1-208ENST00000600970 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
USE1-208ENST00000600970 MANSC4A6NHS7 340 aaPredicted RBP21.5■■□□□ 1.03
USE1-208ENST00000600970 INHBEP58166 350 aa21.5■■□□□ 1.03
USE1-208ENST00000600970 MAP3K11Q16584 847 aa21.5■■□□□ 1.03
USE1-208ENST00000600970 IFNL1Q8IU54 200 aa21.5■■□□□ 1.03
USE1-208ENST00000600970 SLC10A4Q96EP9 437 aa21.5■■□□□ 1.03
USE1-208ENST00000600970 CD209Q9NNX6 404 aa21.5■■□□□ 1.03
USE1-208ENST00000600970 SSC5DA1L4H1 1573 aa21.49■■□□□ 1.03
USE1-208ENST00000600970 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
USE1-208ENST00000600970 CSF1RP07333 972 aa21.49■■□□□ 1.03
USE1-208ENST00000600970 CHRNDQ07001 517 aa21.49■■□□□ 1.03
USE1-208ENST00000600970 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
USE1-208ENST00000600970 TSR2Q969E8 191 aaKnown RBP21.49■■□□□ 1.03
USE1-208ENST00000600970 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
USE1-208ENST00000600970 KCNJ4P48050 445 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 CASP7P55210 303 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 GCKRQ14397 625 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 CERS5Q8N5B7 392 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 MTMR14Q8NCE2 650 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 WNK4Q96J92 1243 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 CLMNQ96JQ2 1002 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 TRIM17Q9Y577 477 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 PCDHAC2Q9Y5I4 1007 aa21.48■■□□□ 1.03
USE1-208ENST00000600970 IGF2BP3O00425 579 aaKnown RBP eCLIP21.47■■□□□ 1.03
USE1-208ENST00000600970 ZBTB48P10074 688 aaPredicted RBP21.47■■□□□ 1.03
USE1-208ENST00000600970 OTOP1Q7RTM1 612 aa21.47■■□□□ 1.03
USE1-208ENST00000600970 IRS2Q9Y4H2 1338 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms