RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SKAP1Q86WV1 359 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 OTUD7AQ8TE49 926 aaPredicted RBP25.12■■□□□ 1.61
PNKP-215ENST00000600910 XAGE2Q96GT9 111 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 GPR101Q96P66 508 aaPredicted RBP25.12■■□□□ 1.61
PNKP-215ENST00000600910 DBNDD2Q9BQY9 259 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 DBNLQ9UJU6 430 aaKnown RBP25.12■■□□□ 1.61
PNKP-215ENST00000600910 ARAP2Q8WZ64 1704 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 KLRK1P26718 216 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 PDE4AP27815 886 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 ADORA1P30542 326 aa25.12■■□□□ 1.61
PNKP-215ENST00000600910 RTFDC1Q9BY42 306 aaPredicted RBP25.11■■□□□ 1.61
PNKP-215ENST00000600910 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
PNKP-215ENST00000600910 SALL3Q9BXA9 1300 aa25.09■■□□□ 1.61
PNKP-215ENST00000600910 IRS2Q9Y4H2 1338 aa25.09■■□□□ 1.61
PNKP-215ENST00000600910 GORABQ5T7V8 394 aa25.08■■□□□ 1.61
PNKP-215ENST00000600910 TXNRD3Q86VQ6 643 aa25.08■■□□□ 1.61
PNKP-215ENST00000600910 PSMD1Q99460 953 aa25.08■■□□□ 1.61
PNKP-215ENST00000600910 FER1L6Q2WGJ9 1857 aa25.08■■□□□ 1.61
PNKP-215ENST00000600910 MED23Q9ULK4 1368 aa25.08■■□□□ 1.61
PNKP-215ENST00000600910 FKBP4Q02790 459 aaKnown RBP eCLIP25.08■■□□□ 1.6
PNKP-215ENST00000600910 SUPT20HQ8NEM7 779 aa25.08■■□□□ 1.6
PNKP-215ENST00000600910 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.6
PNKP-215ENST00000600910 MX1P20591 662 aa25.07■■□□□ 1.6
PNKP-215ENST00000600910 GYG1P46976 350 aa25.07■■□□□ 1.6
PNKP-215ENST00000600910 WASHC4Q2M389 1173 aa25.07■■□□□ 1.6
PNKP-215ENST00000600910 C15orf52Q6ZUT6 534 aaKnown RBP25.07■■□□□ 1.6
PNKP-215ENST00000600910 EYA3Q99504 573 aa25.07■■□□□ 1.6
PNKP-215ENST00000600910 UTRNP46939 3433 aa25.06■■□□□ 1.6
PNKP-215ENST00000600910 BCAMP50895 628 aa25.06■■□□□ 1.6
PNKP-215ENST00000600910 CAVIN4Q5BKX8 364 aa25.06■■□□□ 1.6
PNKP-215ENST00000600910 PLEKHM2Q8IWE5 1019 aa25.06■■□□□ 1.6
PNKP-215ENST00000600910 FAM84BQ96KN1 310 aaPredicted RBP25.06■■□□□ 1.6
PNKP-215ENST00000600910 NFKBIEO00221 500 aa25.05■■□□□ 1.6
PNKP-215ENST00000600910 RIMBP2O15034 1052 aa25.05■■□□□ 1.6
PNKP-215ENST00000600910 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
PNKP-215ENST00000600910 CCDC102BQ68D86 513 aa25.05■■□□□ 1.6
PNKP-215ENST00000600910 ZC3H12CQ9C0D7 883 aaKnown RBP25.05■■□□□ 1.6
PNKP-215ENST00000600910 TAOK3Q9H2K8 898 aa25.05■■□□□ 1.6
PNKP-215ENST00000600910 PHKA1P46020 1223 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 RGS3P49796 1198 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 PDE1AP54750 535 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 CCDC158Q5M9N0 1113 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 GPATCH3Q96I76 525 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 VPS37DQ86XT2 251 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 ECHDC1Q9NTX5 307 aa25.04■■□□□ 1.6
PNKP-215ENST00000600910 HIBADHP31937 336 aaKnown RBP25.03■■□□□ 1.6
PNKP-215ENST00000600910 TTC39AQ5SRH9 613 aa25.03■■□□□ 1.6
PNKP-215ENST00000600910 FBXO33Q7Z6M2 555 aa25.03■■□□□ 1.6
PNKP-215ENST00000600910 ZNF277Q9NRM2 450 aaPredicted RBP25.03■■□□□ 1.6
PNKP-215ENST00000600910 STAP2Q9UGK3 403 aa25.03■■□□□ 1.6
PNKP-215ENST00000600910 TTC41PQ6P2S7 1318 aa25.03■■□□□ 1.6
PNKP-215ENST00000600910 AOC3Q16853 763 aa25.02■■□□□ 1.6
PNKP-215ENST00000600910 ARHGAP27Q6ZUM4 889 aa25.02■■□□□ 1.6
PNKP-215ENST00000600910 ZNF804AQ7Z570 1209 aa25.02■■□□□ 1.6
PNKP-215ENST00000600910 PPIP5K2O43314 1243 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 RASSF7Q02833 373 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 KIAA2012Q0VF49 1180 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 GPR162Q16538 588 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 LTBP3Q9NS15 1303 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 OSBPL3Q9H4L5 887 aa25.01■■□□□ 1.59
PNKP-215ENST00000600910 ARID4AP29374 1257 aaPredicted RBP25■■□□□ 1.59
PNKP-215ENST00000600910 PI4K2BQ8TCG2 481 aa25■■□□□ 1.59
PNKP-215ENST00000600910 VPS33BQ9H267 617 aa25■■□□□ 1.59
PNKP-215ENST00000600910 UQCRFS1P1P0C7P4 283 aa24.99■■□□□ 1.59
PNKP-215ENST00000600910 ATP5JP18859 108 aa24.99■■□□□ 1.59
PNKP-215ENST00000600910 IARSP41252 1262 aaKnown RBP24.99■■□□□ 1.59
PNKP-215ENST00000600910 DOK7Q18PE1 504 aa24.99■■□□□ 1.59
PNKP-215ENST00000600910 ZNF512BQ96KM6 892 aaPredicted RBP24.99■■□□□ 1.59
PNKP-215ENST00000600910 CD209Q9NNX6 404 aa24.99■■□□□ 1.59
PNKP-215ENST00000600910 GNL3LQ9NVN8 582 aaKnown RBP24.99■■□□□ 1.59
PNKP-215ENST00000600910 IQSEC3Q9UPP2 1182 aaPredicted RBP24.99■■□□□ 1.59
PNKP-215ENST00000600910 AOX1Q06278 1338 aa24.98■■□□□ 1.59
PNKP-215ENST00000600910 ERC2O15083 957 aa24.98■■□□□ 1.59
PNKP-215ENST00000600910 COA1Q9GZY4 146 aa24.98■■□□□ 1.59
PNKP-215ENST00000600910 G3V3G9 751 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 SCARF1Q14162 830 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 DCAF8Q5TAQ9 597 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 LARGE2Q8N3Y3 721 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 BOLA2Q9H3K6 86 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 DBNDD1Q9H9R9 158 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 GLRX3O76003 335 aaKnown RBP24.97■■□□□ 1.59
PNKP-215ENST00000600910 MCAMP43121 646 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 RASGRF1Q13972 1273 aa24.97■■□□□ 1.59
PNKP-215ENST00000600910 FRAT2O75474 233 aaPredicted RBP24.96■■□□□ 1.59
PNKP-215ENST00000600910 IL1R1P14778 569 aa24.96■■□□□ 1.59
PNKP-215ENST00000600910 PRELPP51888 382 aa24.96■■□□□ 1.59
PNKP-215ENST00000600910 TDRD7Q8NHU6 1098 aaKnown RBP24.96■■□□□ 1.59
PNKP-215ENST00000600910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.96■■□□□ 1.59
PNKP-215ENST00000600910 COL4A5P29400 1685 aa24.95■■□□□ 1.59
PNKP-215ENST00000600910 PI16Q6UXB8 463 aa24.95■■□□□ 1.58
PNKP-215ENST00000600910 ECE2O60344 883 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 SNRKQ9NRH2 765 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 HMG20BQ9P0W2 317 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 NDUFB9Q9Y6M9 179 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 COL1A1P02452 1464 aaPredicted RBP24.94■■□□□ 1.58
PNKP-215ENST00000600910 SEMA3EO15041 775 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 GRIN3BO60391 1043 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 TTC22Q5TAA0 569 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 PODNQ7Z5L7 613 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 SPATA5Q8NB90 893 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms