RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 BRCA2P51587 3418 aa12.94□□□□□ -0.34
HIF3A-219ENST00000600879 XDHP47989 1333 aa12.93□□□□□ -0.34
HIF3A-219ENST00000600879 NF2P35240 595 aa12.93□□□□□ -0.34
HIF3A-219ENST00000600879 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
HIF3A-219ENST00000600879 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
HIF3A-219ENST00000600879 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
HIF3A-219ENST00000600879 ZBTB38Q8NAP3 1195 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-219ENST00000600879 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
HIF3A-219ENST00000600879 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 PTPN22Q9Y2R2 807 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
HIF3A-219ENST00000600879 PSME4Q14997 1843 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 ATP2B4P23634 1241 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
HIF3A-219ENST00000600879 LDLRAD1Q5T700 205 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 CFHR5Q9BXR6 569 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
HIF3A-219ENST00000600879 H0YGN5 161 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 PDE8AO60658 829 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 KLRK1P26718 216 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 CRHR2Q13324 411 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
HIF3A-219ENST00000600879 TXNRD3Q86VQ6 643 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 KIAA0825Q8IV33 1275 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 SLC10A4Q96EP9 437 aa12.9□□□□□ -0.34
HIF3A-219ENST00000600879 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-219ENST00000600879 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-219ENST00000600879 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-219ENST00000600879 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-219ENST00000600879 GJA5P36382 358 aa12.89□□□□□ -0.35
HIF3A-219ENST00000600879 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
HIF3A-219ENST00000600879 SSC5DA1L4H1 1573 aa12.89□□□□□ -0.35
HIF3A-219ENST00000600879 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-219ENST00000600879 HOXB7P09629 217 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 HSP90B1P14625 803 aaKnown RBP12.88□□□□□ -0.35
HIF3A-219ENST00000600879 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 CWC25Q9NXE8 425 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-219ENST00000600879 MINPP1Q9UNW1 487 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 SZT2Q5T011 3432 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 AOX1Q06278 1338 aa12.88□□□□□ -0.35
HIF3A-219ENST00000600879 ALDH1A1P00352 501 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
HIF3A-219ENST00000600879 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
HIF3A-219ENST00000600879 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 ERO1AQ96HE7 468 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
HIF3A-219ENST00000600879 PTPN18Q99952 460 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 GREM2Q9H772 168 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
HIF3A-219ENST00000600879 CLRN2A0PK11 232 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-219ENST00000600879 CTSWP56202 376 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
HIF3A-219ENST00000600879 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-219ENST00000600879 DLL1O00548 723 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 GTF2IP78347 998 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 JAG2Q9Y219 1238 aa12.85□□□□□ -0.35
HIF3A-219ENST00000600879 SNAP23O00161 211 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 SP3Q02447 781 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 SLC9C1Q4G0N8 1177 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-219ENST00000600879 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 ZBED3Q96IU2 234 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-219ENST00000600879 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-219ENST00000600879 ELP3Q9H9T3 547 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-219ENST00000600879 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
HIF3A-219ENST00000600879 KIAA0100Q14667 2235 aaKnown RBP12.83□□□□□ -0.36
HIF3A-219ENST00000600879 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-219ENST00000600879 INHBEP58166 350 aa12.83□□□□□ -0.36
HIF3A-219ENST00000600879 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
HIF3A-219ENST00000600879 CERS5Q8N5B7 392 aa12.83□□□□□ -0.36
HIF3A-219ENST00000600879 ARHGAP39Q9C0H5 1083 aa12.83□□□□□ -0.36
HIF3A-219ENST00000600879 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
HIF3A-219ENST00000600879 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
HIF3A-219ENST00000600879 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
HIF3A-219ENST00000600879 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms