RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 DCPSQ96C86 337 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-226ENST00000600791 HHIPL1Q96JK4 782 aa19.11■□□□□ 0.65
SHKBP1-226ENST00000600791 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
SHKBP1-226ENST00000600791 GGA3Q9NZ52 723 aa19.11■□□□□ 0.65
SHKBP1-226ENST00000600791 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
SHKBP1-226ENST00000600791 ZNF804BA4D1E1 1349 aa19.1■□□□□ 0.65
SHKBP1-226ENST00000600791 ANKRD18BA2A2Z9 1011 aa19.1■□□□□ 0.65
SHKBP1-226ENST00000600791 FOXO4P98177 505 aa19.1■□□□□ 0.65
SHKBP1-226ENST00000600791 ANKRD2Q9GZV1 360 aa19.1■□□□□ 0.65
SHKBP1-226ENST00000600791 AOC2O75106 756 aa19.09■□□□□ 0.65
SHKBP1-226ENST00000600791 USP17L8P0C7I0 530 aa19.09■□□□□ 0.65
SHKBP1-226ENST00000600791 KLRK1P26718 216 aa19.09■□□□□ 0.65
SHKBP1-226ENST00000600791 COA1Q9GZY4 146 aa19.09■□□□□ 0.65
SHKBP1-226ENST00000600791 GRM8O00222 908 aa19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 HSPA8P11142 646 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 LBX1P52954 281 aa19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 CHRNDQ07001 517 aa19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 DACT2Q5SW24 774 aa19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 MYOZ2Q9NPC6 264 aa19.08■□□□□ 0.64
SHKBP1-226ENST00000600791 CAPN15O75808 1086 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 MAP2K2P36507 400 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 IFIT5Q13325 482 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 SCARF1Q14162 830 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 EPHA10Q5JZY3 1008 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 SLC4A10Q6U841 1118 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 SULF1Q8IWU6 871 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 MXD3Q9BW11 206 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 CHMP3Q9Y3E7 222 aa19.07■□□□□ 0.64
SHKBP1-226ENST00000600791 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 KCNJ4P48050 445 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 HUNKP57058 714 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 STRIP1Q5VSL9 837 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 ANGEL2Q5VTE6 544 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 LMBR1LQ6UX01 489 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 FBXW7Q969H0 707 aa19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 GBA2Q9HCG7 927 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-226ENST00000600791 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
SHKBP1-226ENST00000600791 SRCIN1Q9C0H9 1055 aa19.05■□□□□ 0.64
SHKBP1-226ENST00000600791 C9orf78Q9NZ63 289 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-226ENST00000600791 IRS2Q9Y4H2 1338 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 E9PSI1 815 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 SNAP23O00161 211 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 TAF5LO75529 589 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 CDCA5Q96FF9 252 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 BEGAINQ9BUH8 593 aa19.04■□□□□ 0.64
SHKBP1-226ENST00000600791 PITPNM2Q9BZ72 1349 aa19.03■□□□□ 0.64
SHKBP1-226ENST00000600791 CCDC57Q2TAC2 916 aa19.03■□□□□ 0.64
SHKBP1-226ENST00000600791 MRPL50Q8N5N7 158 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-226ENST00000600791 C2orf69Q8N8R5 385 aa19.03■□□□□ 0.64
SHKBP1-226ENST00000600791 ZNF594Q96JF6 807 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-226ENST00000600791 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-226ENST00000600791 NBPF9Q3BBW0 867 aa19.02■□□□□ 0.64
SHKBP1-226ENST00000600791 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SHKBP1-226ENST00000600791 OGFOD1Q8N543 542 aa19.02■□□□□ 0.64
SHKBP1-226ENST00000600791 CD209Q9NNX6 404 aa19.02■□□□□ 0.64
SHKBP1-226ENST00000600791 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 GTF2IP78347 998 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 NOGQ13253 232 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 RGMBQ6NW40 437 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 C15orf52Q6ZUT6 534 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 KAZALD1Q96I82 304 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 SUCLG2Q96I99 432 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 ZIC5Q96T25 663 aa19.01■□□□□ 0.63
SHKBP1-226ENST00000600791 UTYO14607 1347 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 FAM155AB1AL88 458 aaPredicted RBP19■□□□□ 0.63
SHKBP1-226ENST00000600791 LDHAL6AQ6ZMR3 332 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 TSKSQ9UJT2 592 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 SCAF8Q9UPN6 1271 aaKnown RBP19■□□□□ 0.63
SHKBP1-226ENST00000600791 PAPPA2Q9BXP8 1791 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 PTPRCP08575 1304 aa19■□□□□ 0.63
SHKBP1-226ENST00000600791 WNT10BO00744 389 aa18.99■□□□□ 0.63
SHKBP1-226ENST00000600791 SASH1O94885 1247 aa18.99■□□□□ 0.63
SHKBP1-226ENST00000600791 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
SHKBP1-226ENST00000600791 CNNM1Q9NRU3 951 aa18.99■□□□□ 0.63
SHKBP1-226ENST00000600791 CA12O43570 354 aa18.98■□□□□ 0.63
SHKBP1-226ENST00000600791 MMP14P50281 582 aa18.98■□□□□ 0.63
SHKBP1-226ENST00000600791 ZNF157P51786 506 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-226ENST00000600791 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
SHKBP1-226ENST00000600791 CDCA7LQ96GN5 454 aa18.98■□□□□ 0.63
SHKBP1-226ENST00000600791 PLIN1O60240 522 aa18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 IL1R1P14778 569 aa18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 CCDC102AQ96A19 550 aa18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 HDAC9Q9UKV0 1011 aa18.97■□□□□ 0.63
SHKBP1-226ENST00000600791 SLC10A3P09131 477 aa18.96■□□□□ 0.63
SHKBP1-226ENST00000600791 FKBP1BP68106 108 aa18.96■□□□□ 0.63
SHKBP1-226ENST00000600791 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-226ENST00000600791 PUS3Q9BZE2 481 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-226ENST00000600791 PRAMEF18Q5VWM3 479 aa18.95■□□□□ 0.62
SHKBP1-226ENST00000600791 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
SHKBP1-226ENST00000600791 ZBED3Q96IU2 234 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-226ENST00000600791 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-226ENST00000600791 ALDH1L2Q3SY69 923 aa18.94■□□□□ 0.62
SHKBP1-226ENST00000600791 MOB2Q70IA6 237 aa18.94■□□□□ 0.62
SHKBP1-226ENST00000600791 TRMT2AQ8IZ69 625 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms