RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IL1R1P14778 569 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 FGFR2P21802 821 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-208ENST00000600628 HTRA3P83110 453 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 UBE4AQ14139 1066 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-208ENST00000600628 DACT2Q5SW24 774 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 COA1Q9GZY4 146 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 ADARB2Q9NS39 739 aaKnown RBP11.04□□□□□ -0.64
SSBP4-208ENST00000600628 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
SSBP4-208ENST00000600628 SHTN1A0MZ66 631 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 TAF5LO75529 589 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 GNAI3P08754 354 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 UBTFL1P0CB47 393 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-208ENST00000600628 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 KLHDC4Q8TBB5 520 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
SSBP4-208ENST00000600628 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 CNOT7Q9UIV1 285 aaKnown RBP11.03□□□□□ -0.64
SSBP4-208ENST00000600628 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-208ENST00000600628 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
SSBP4-208ENST00000600628 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
SSBP4-208ENST00000600628 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-208ENST00000600628 CIAO1O76071 339 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 EGFRP00533 1210 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 STRIP1Q5VSL9 837 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-208ENST00000600628 FBXO33Q7Z6M2 555 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 HELBQ8NG08 1087 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-208ENST00000600628 FAM84BQ96KN1 310 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-208ENST00000600628 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.65
SSBP4-208ENST00000600628 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 EYA2O00167 538 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 PDE8BO95263 885 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 MMP14P50281 582 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 FKBP1AP62942 108 aaKnown RBP11.01□□□□□ -0.65
SSBP4-208ENST00000600628 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 ZBED3Q96IU2 234 aaPredicted RBP11.01□□□□□ -0.65
SSBP4-208ENST00000600628 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
SSBP4-208ENST00000600628 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 G3V3G9 751 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 POLA2Q14181 598 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 MAP1SQ66K74 1059 aaPredicted RBP11□□□□□ -0.65
SSBP4-208ENST00000600628 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
SSBP4-208ENST00000600628 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
SSBP4-208ENST00000600628 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
SSBP4-208ENST00000600628 CLUAP1Q96AJ1 413 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 KLRG1Q96E93 195 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 FAM205AQ6ZU69 1335 aa11□□□□□ -0.65
SSBP4-208ENST00000600628 H7C1D1 291 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 SASH1O94885 1247 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 CERS5Q8N5B7 392 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 SSH3Q8TE77 659 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 MYH13Q9UKX3 1938 aa10.99□□□□□ -0.65
SSBP4-208ENST00000600628 PNMA6EA0A0J9YXQ4 647 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 GNAI2P04899 355 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 SAMD7Q7Z3H4 446 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 MTMR14Q8NCE2 650 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
SSBP4-208ENST00000600628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
SSBP4-208ENST00000600628 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 IL15P40933 162 aaPredicted RBP10.97□□□□□ -0.65
SSBP4-208ENST00000600628 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
SSBP4-208ENST00000600628 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 CST9Q5W186 159 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 ZNF804AQ7Z570 1209 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 MXD3Q9BW11 206 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 PA2G4Q9UQ80 394 aaKnown RBP10.97□□□□□ -0.65
SSBP4-208ENST00000600628 PITPNM2Q9BZ72 1349 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 THSD7BQ9C0I4 1608 aa10.97□□□□□ -0.65
SSBP4-208ENST00000600628 COL1A1P02452 1464 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-208ENST00000600628 SRGAP3O43295 1099 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 HIBADHP31937 336 aaKnown RBP10.96□□□□□ -0.65
SSBP4-208ENST00000600628 GYG1P46976 350 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 KCNJ4P48050 445 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 GTF2IP78347 998 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 ATP8B2P98198 1209 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 PANK1Q8TE04 598 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 LPIN2Q92539 896 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 MYOZ2Q9NPC6 264 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 ZBTB40Q9NUA8 1239 aa10.96□□□□□ -0.65
SSBP4-208ENST00000600628 NOP58Q9Y2X3 529 aaKnown RBP10.96□□□□□ -0.65
SSBP4-208ENST00000600628 PLIN1O60240 522 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms