RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 OS9Q13438 667 aaPredicted RBP23.94■■□□□ 1.42
UPF1-209ENST00000600310 DBNDD1Q9H9R9 158 aa23.94■■□□□ 1.42
UPF1-209ENST00000600310 G3V3G9 751 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 ECE2O60344 883 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 EIF6P56537 245 aaKnown RBP23.93■■□□□ 1.42
UPF1-209ENST00000600310 HSP90AB4PQ58FF6 505 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 DCAF8Q5TAQ9 597 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 LPIN2Q92539 896 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 COA1Q9GZY4 146 aa23.93■■□□□ 1.42
UPF1-209ENST00000600310 YDJCA8MPS7 323 aa23.92■■□□□ 1.42
UPF1-209ENST00000600310 IFIT1P09914 478 aaKnown RBP23.92■■□□□ 1.42
UPF1-209ENST00000600310 ATP2B3Q16720 1220 aa23.92■■□□□ 1.42
UPF1-209ENST00000600310 EXOC6BQ9Y2D4 811 aa23.92■■□□□ 1.42
UPF1-209ENST00000600310 AKAP2Q9Y2D5 859 aa23.92■■□□□ 1.42
UPF1-209ENST00000600310 SLC5A1P13866 664 aa23.91■■□□□ 1.42
UPF1-209ENST00000600310 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
UPF1-209ENST00000600310 PODNQ7Z5L7 613 aa23.91■■□□□ 1.42
UPF1-209ENST00000600310 ERC1Q8IUD2 1116 aa23.91■■□□□ 1.42
UPF1-209ENST00000600310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.91■■□□□ 1.42
UPF1-209ENST00000600310 ZNF541Q9H0D2 1346 aa23.9■■□□□ 1.42
UPF1-209ENST00000600310 GLTPD2A6NH11 291 aa23.9■■□□□ 1.42
UPF1-209ENST00000600310 CXCL9Q07325 125 aa23.9■■□□□ 1.42
UPF1-209ENST00000600310 FAM84BQ96KN1 310 aaPredicted RBP23.9■■□□□ 1.42
UPF1-209ENST00000600310 CD209Q9NNX6 404 aa23.9■■□□□ 1.42
UPF1-209ENST00000600310 TIAM2Q8IVF5 1701 aa23.9■■□□□ 1.42
UPF1-209ENST00000600310 ZNF804AQ7Z570 1209 aa23.89■■□□□ 1.41
UPF1-209ENST00000600310 FBXO33Q7Z6M2 555 aa23.89■■□□□ 1.41
UPF1-209ENST00000600310 GPR108Q9NPR9 543 aa23.89■■□□□ 1.41
UPF1-209ENST00000600310 RAB11FIP3O75154 756 aa23.88■■□□□ 1.41
UPF1-209ENST00000600310 HIBADHP31937 336 aaKnown RBP23.88■■□□□ 1.41
UPF1-209ENST00000600310 GYG1P46976 350 aa23.88■■□□□ 1.41
UPF1-209ENST00000600310 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
UPF1-209ENST00000600310 A0A1B0GUL7 405 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 RAD17O75943 681 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 DDNO94850 711 aaPredicted RBP23.87■■□□□ 1.41
UPF1-209ENST00000600310 IL1R1P14778 569 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 TIMM10P62072 90 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 CAVIN4Q5BKX8 364 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 CIAPIN1Q6FI81 312 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 KCNQ5Q9NR82 932 aa23.87■■□□□ 1.41
UPF1-209ENST00000600310 HDAC1Q13547 482 aaPredicted RBP23.86■■□□□ 1.41
UPF1-209ENST00000600310 TNIP1Q15025 636 aa23.86■■□□□ 1.41
UPF1-209ENST00000600310 GPC2Q8N158 579 aa23.86■■□□□ 1.41
UPF1-209ENST00000600310 RHPN1Q8TCX5 695 aa23.86■■□□□ 1.41
UPF1-209ENST00000600310 KIF1BPQ96EK5 621 aa23.86■■□□□ 1.41
UPF1-209ENST00000600310 KDM2BQ8NHM5 1336 aa23.85■■□□□ 1.41
UPF1-209ENST00000600310 TNNI3KQ59H18 835 aa23.85■■□□□ 1.41
UPF1-209ENST00000600310 TDRD7Q8NHU6 1098 aaKnown RBP23.85■■□□□ 1.41
UPF1-209ENST00000600310 FPGT-TNNI3KV9GXZ4 949 aa23.85■■□□□ 1.41
UPF1-209ENST00000600310 ZNF609O15014 1411 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 ADORA1P30542 326 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 BCAMP50895 628 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 VPS37DQ86XT2 251 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 XAGE2Q96GT9 111 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 GJA3Q9Y6H8 435 aa23.84■■□□□ 1.41
UPF1-209ENST00000600310 USP17L3A6NCW0 530 aa23.83■■□□□ 1.41
UPF1-209ENST00000600310 USP17L4A6NCW7 530 aa23.83■■□□□ 1.41
UPF1-209ENST00000600310 PSMD14O00487 310 aa23.83■■□□□ 1.41
UPF1-209ENST00000600310 VIL1P09327 827 aaKnown RBP23.83■■□□□ 1.41
UPF1-209ENST00000600310 USP17L1Q7RTZ2 530 aa23.83■■□□□ 1.41
UPF1-209ENST00000600310 NEUROD6Q96NK8 337 aa23.83■■□□□ 1.41
UPF1-209ENST00000600310 APBB1O00213 710 aa23.82■■□□□ 1.4
UPF1-209ENST00000600310 STRIP1Q5VSL9 837 aa23.82■■□□□ 1.4
UPF1-209ENST00000600310 ZNF526Q8TF50 670 aaPredicted RBP23.82■■□□□ 1.4
UPF1-209ENST00000600310 L3MBTL3Q96JM7 780 aaPredicted RBP23.82■■□□□ 1.4
UPF1-209ENST00000600310 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
UPF1-209ENST00000600310 EAF2Q96CJ1 260 aaPredicted RBP23.81■■□□□ 1.4
UPF1-209ENST00000600310 IL1RAPL2Q9NP60 686 aa23.81■■□□□ 1.4
UPF1-209ENST00000600310 ZBTB22O15209 634 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 PHKA1P46020 1223 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 GTF2IP78347 998 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 CCDC102BQ68D86 513 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 CLASRPQ8N2M8 674 aaKnown RBP23.8■■□□□ 1.4
UPF1-209ENST00000600310 LRRCC1Q9C099 1032 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
UPF1-209ENST00000600310 GPBP1L1Q9HC44 474 aaPredicted RBP23.8■■□□□ 1.4
UPF1-209ENST00000600310 SCN9AQ15858 1988 aa23.8■■□□□ 1.4
UPF1-209ENST00000600310 DACT2Q5SW24 774 aa23.79■■□□□ 1.4
UPF1-209ENST00000600310 RSBN1LQ6PCB5 846 aaPredicted RBP23.79■■□□□ 1.4
UPF1-209ENST00000600310 DBNDD2Q9BQY9 259 aa23.79■■□□□ 1.4
UPF1-209ENST00000600310 GNL3LQ9NVN8 582 aaKnown RBP23.79■■□□□ 1.4
UPF1-209ENST00000600310 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
UPF1-209ENST00000600310 POTECB2RU33 542 aa23.78■■□□□ 1.4
UPF1-209ENST00000600310 RPS12P25398 132 aaKnown RBP23.78■■□□□ 1.4
UPF1-209ENST00000600310 GMPSP49915 693 aaPredicted RBP23.78■■□□□ 1.4
UPF1-209ENST00000600310 AACSQ86V21 672 aa23.78■■□□□ 1.4
UPF1-209ENST00000600310 IQSEC3Q9UPP2 1182 aaPredicted RBP23.78■■□□□ 1.4
UPF1-209ENST00000600310 ZBTB12Q9Y330 459 aaPredicted RBP23.78■■□□□ 1.4
UPF1-209ENST00000600310 IGHDP01880 384 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 SCNN1DP51172 638 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 GORABQ5T7V8 394 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 AGBL3Q8NEM8 1001 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 DPF2Q92785 391 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 FBXW7Q969H0 707 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 GCC1Q96CN9 775 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 CCDC8Q9H0W5 538 aaPredicted RBP23.77■■□□□ 1.4
UPF1-209ENST00000600310 RRAGCQ9HB90 399 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 NMRK2Q9NPI5 230 aa23.77■■□□□ 1.4
UPF1-209ENST00000600310 DBNLQ9UJU6 430 aaKnown RBP23.77■■□□□ 1.4
UPF1-209ENST00000600310 ARAP2Q8WZ64 1704 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms