RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
VRK3-221ENST00000600284 CTCFP49711 727 aaPredicted RBP20.01■□□□□ 0.79
VRK3-221ENST00000600284 SLFN5Q08AF3 891 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 PAXIP1Q6ZW49 1069 aaPredicted RBP20.01■□□□□ 0.79
VRK3-221ENST00000600284 MRPL50Q8N5N7 158 aaKnown RBP20.01■□□□□ 0.79
VRK3-221ENST00000600284 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
VRK3-221ENST00000600284 PSME4Q14997 1843 aa20■□□□□ 0.79
VRK3-221ENST00000600284 CCER2I3L3R5 266 aa20■□□□□ 0.79
VRK3-221ENST00000600284 MAP2K2P36507 400 aa20■□□□□ 0.79
VRK3-221ENST00000600284 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
VRK3-221ENST00000600284 DACT2Q5SW24 774 aa20■□□□□ 0.79
VRK3-221ENST00000600284 CYP4F22Q6NT55 531 aa20■□□□□ 0.79
VRK3-221ENST00000600284 C15orf52Q6ZUT6 534 aaKnown RBP20■□□□□ 0.79
VRK3-221ENST00000600284 TXNRD3Q86VQ6 643 aa20■□□□□ 0.79
VRK3-221ENST00000600284 TNS4Q8IZW8 715 aa20■□□□□ 0.79
VRK3-221ENST00000600284 ZNF408Q9H9D4 720 aa20■□□□□ 0.79
VRK3-221ENST00000600284 PTPRCP08575 1304 aa20■□□□□ 0.79
VRK3-221ENST00000600284 KCNJ4P48050 445 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 CHMP3Q9Y3E7 222 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
VRK3-221ENST00000600284 SCARF1Q14162 830 aa19.98■□□□□ 0.79
VRK3-221ENST00000600284 OGFOD1Q8N543 542 aa19.98■□□□□ 0.79
VRK3-221ENST00000600284 GGA3Q9NZ52 723 aa19.98■□□□□ 0.79
VRK3-221ENST00000600284 UTYO14607 1347 aa19.98■□□□□ 0.79
VRK3-221ENST00000600284 ALDH1L2Q3SY69 923 aa19.97■□□□□ 0.79
VRK3-221ENST00000600284 TTLL5Q6EMB2 1281 aa19.97■□□□□ 0.79
VRK3-221ENST00000600284 LDHAL6AQ6ZMR3 332 aa19.97■□□□□ 0.79
VRK3-221ENST00000600284 PITPNM2Q9BZ72 1349 aa19.97■□□□□ 0.79
VRK3-221ENST00000600284 TAF7LQ5H9L4 462 aa19.96■□□□□ 0.79
VRK3-221ENST00000600284 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
VRK3-221ENST00000600284 C2orf69Q8N8R5 385 aa19.96■□□□□ 0.79
VRK3-221ENST00000600284 SSH1Q8WYL5 1049 aa19.96■□□□□ 0.79
VRK3-221ENST00000600284 BEGAINQ9BUH8 593 aa19.96■□□□□ 0.79
VRK3-221ENST00000600284 GBA2Q9HCG7 927 aaPredicted RBP19.96■□□□□ 0.79
VRK3-221ENST00000600284 THSD7BQ9C0I4 1608 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 ADM5C9JUS6 153 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 TAF5LO75529 589 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 KLRK1P26718 216 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 HUNKP57058 714 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 GRM1Q13255 1194 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 ANGEL2Q5VTE6 544 aaKnown RBP19.95■□□□□ 0.78
VRK3-221ENST00000600284 CD209Q9NNX6 404 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 IRS2Q9Y4H2 1338 aa19.95■□□□□ 0.78
VRK3-221ENST00000600284 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
VRK3-221ENST00000600284 NBPF7P0C2Y1 421 aaPredicted RBP19.94■□□□□ 0.78
VRK3-221ENST00000600284 DLK2Q6UY11 383 aa19.94■□□□□ 0.78
VRK3-221ENST00000600284 HELBQ8NG08 1087 aaPredicted RBP19.94■□□□□ 0.78
VRK3-221ENST00000600284 FBXW7Q969H0 707 aa19.94■□□□□ 0.78
VRK3-221ENST00000600284 KAZALD1Q96I82 304 aa19.94■□□□□ 0.78
VRK3-221ENST00000600284 SUCLG2Q96I99 432 aa19.94■□□□□ 0.78
VRK3-221ENST00000600284 CNNM1Q9NRU3 951 aa19.94■□□□□ 0.78
VRK3-221ENST00000600284 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
VRK3-221ENST00000600284 GTF2IP78347 998 aa19.93■□□□□ 0.78
VRK3-221ENST00000600284 ZNF804AQ7Z570 1209 aa19.93■□□□□ 0.78
VRK3-221ENST00000600284 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
VRK3-221ENST00000600284 ZNF594Q96JF6 807 aaPredicted RBP19.93■□□□□ 0.78
VRK3-221ENST00000600284 MXD3Q9BW11 206 aa19.93■□□□□ 0.78
VRK3-221ENST00000600284 HDAC9Q9UKV0 1011 aa19.93■□□□□ 0.78
VRK3-221ENST00000600284 ASTN2O75129 1339 aaPredicted RBP19.93■□□□□ 0.78
VRK3-221ENST00000600284 AOC2O75106 756 aa19.92■□□□□ 0.78
VRK3-221ENST00000600284 HSPA8P11142 646 aaKnown RBP19.92■□□□□ 0.78
VRK3-221ENST00000600284 IL1R1P14778 569 aa19.92■□□□□ 0.78
VRK3-221ENST00000600284 LBX1P52954 281 aa19.92■□□□□ 0.78
VRK3-221ENST00000600284 BRPF1P55201 1214 aaPredicted RBP19.92■□□□□ 0.78
VRK3-221ENST00000600284 NOGQ13253 232 aa19.92■□□□□ 0.78
VRK3-221ENST00000600284 RABL6Q3YEC7 729 aaPredicted RBP19.92■□□□□ 0.78
VRK3-221ENST00000600284 CDCA5Q96FF9 252 aa19.92■□□□□ 0.78
VRK3-221ENST00000600284 SNAP23O00161 211 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 WNT10BO00744 389 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 CA12O43570 354 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 FKBP1BP68106 108 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 RGMBQ6NW40 437 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 CCDC102AQ96A19 550 aa19.91■□□□□ 0.78
VRK3-221ENST00000600284 FKBP1AP62942 108 aaKnown RBP19.9■□□□□ 0.78
VRK3-221ENST00000600284 UBE4AQ14139 1066 aa19.9■□□□□ 0.78
VRK3-221ENST00000600284 NBPF9Q3BBW0 867 aa19.9■□□□□ 0.78
VRK3-221ENST00000600284 BICC1Q9H694 974 aaKnown RBP19.9■□□□□ 0.78
VRK3-221ENST00000600284 ZNF646O15015 1829 aaPredicted RBP19.89■□□□□ 0.77
VRK3-221ENST00000600284 PLIN1O60240 522 aa19.89■□□□□ 0.77
VRK3-221ENST00000600284 KIAA0825Q8IV33 1275 aa19.89■□□□□ 0.77
VRK3-221ENST00000600284 USP44Q9H0E7 712 aa19.89■□□□□ 0.77
VRK3-221ENST00000600284 SMC4Q9NTJ3 1288 aa19.89■□□□□ 0.77
VRK3-221ENST00000600284 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
VRK3-221ENST00000600284 MROH5Q6ZUA9 1318 aa19.88■□□□□ 0.77
VRK3-221ENST00000600284 FAM155AB1AL88 458 aaPredicted RBP19.87■□□□□ 0.77
VRK3-221ENST00000600284 SASH1O94885 1247 aa19.87■□□□□ 0.77
VRK3-221ENST00000600284 ZNF157P51786 506 aaPredicted RBP19.87■□□□□ 0.77
VRK3-221ENST00000600284 ANKRD44Q8N8A2 993 aa19.87■□□□□ 0.77
VRK3-221ENST00000600284 MTMR14Q8NCE2 650 aa19.87■□□□□ 0.77
VRK3-221ENST00000600284 ZBED3Q96IU2 234 aaPredicted RBP19.87■□□□□ 0.77
VRK3-221ENST00000600284 PUS3Q9BZE2 481 aaKnown RBP19.87■□□□□ 0.77
VRK3-221ENST00000600284 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
VRK3-221ENST00000600284 APOBEC3FQ8IUX4 373 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms