RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0
TGFB1-204ENST00000600196 ZNF804AQ7Z570 1209 aa15.08■□□□□ 0
TGFB1-204ENST00000600196 GPATCH3Q96I76 525 aa15.08■□□□□ 0
TGFB1-204ENST00000600196 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0
TGFB1-204ENST00000600196 IRS2Q9Y4H2 1338 aa15.08■□□□□ 0
TGFB1-204ENST00000600196 LTBP1Q14766 1721 aa15.07■□□□□ 0
TGFB1-204ENST00000600196 HIBADHP31937 336 aaKnown RBP15.07■□□□□ 0
TGFB1-204ENST00000600196 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
TGFB1-204ENST00000600196 EAF2Q96CJ1 260 aaPredicted RBP15.07■□□□□ 0
TGFB1-204ENST00000600196 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
TGFB1-204ENST00000600196 TTC41PQ6P2S7 1318 aa15.07■□□□□ 0
TGFB1-204ENST00000600196 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 NFKBIEO00221 500 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 IL1R1P14778 569 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 LMNB1P20700 586 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
TGFB1-204ENST00000600196 TIMM10P62072 90 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 ARHGAP27Q6ZUM4 889 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 AACSQ86V21 672 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 XAGE2Q96GT9 111 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 FAM84BQ96KN1 310 aaPredicted RBP15.06■□□□□ 0
TGFB1-204ENST00000600196 STAP2Q9UGK3 403 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 AOX1Q06278 1338 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 ZNF609O15014 1411 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 COL4A1P02462 1669 aa15.06■□□□□ 0
TGFB1-204ENST00000600196 ERC2O15083 957 aa15.05■□□□□ -0
TGFB1-204ENST00000600196 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -02e-10■■□□□ 12.2
TGFB1-204ENST00000600196 FKBP1AP62942 108 aaKnown RBP15.05■□□□□ -0
TGFB1-204ENST00000600196 GORABQ5T7V8 394 aa15.05■□□□□ -0
TGFB1-204ENST00000600196 VPS37DQ86XT2 251 aa15.05■□□□□ -0
TGFB1-204ENST00000600196 TDRD7Q8NHU6 1098 aaKnown RBP15.05■□□□□ -0
TGFB1-204ENST00000600196 JDP2Q8WYK2 163 aa15.05■□□□□ -0
TGFB1-204ENST00000600196 NEUROD6Q96NK8 337 aa15.05■□□□□ -0
TGFB1-204ENST00000600196 ATP5JP18859 108 aa15.04■□□□□ -0
TGFB1-204ENST00000600196 ARID4AP29374 1257 aaPredicted RBP15.04■□□□□ -0
TGFB1-204ENST00000600196 CD209Q9NNX6 404 aa15.04■□□□□ -0
TGFB1-204ENST00000600196 IL1RAPL2Q9NP60 686 aa15.04■□□□□ -0
TGFB1-204ENST00000600196 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
TGFB1-204ENST00000600196 SALL3Q9BXA9 1300 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 G3V3G9 751 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 PPIP5K2O43314 1243 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 CCDC102BQ68D86 513 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 OLFM4Q6UX06 510 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 LARGE2Q8N3Y3 721 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
TGFB1-204ENST00000600196 DBNLQ9UJU6 430 aaKnown RBP15.03■□□□□ -0
TGFB1-204ENST00000600196 DENND2AQ9ULE3 1009 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
TGFB1-204ENST00000600196 DUOX1Q9NRD9 1551 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 FAM205AQ6ZU69 1335 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
TGFB1-204ENST00000600196 MX1P20591 662 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 B4GALNT3Q6L9W6 998 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 NIM1KQ8IY84 436 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 ZGPATQ8N5A5 531 aaKnown RBP15.02■□□□□ -0
TGFB1-204ENST00000600196 TBC1D22AQ8WUA7 517 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 GTF3C3Q9Y5Q9 886 aa15.02■□□□□ -0
TGFB1-204ENST00000600196 A0A1B0GUL6 1792 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 SALL1Q9NSC2 1324 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 FZD9O00144 591 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 APBB1O00213 710 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 TNIP1Q15025 636 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 WDR66Q8TBY9 1149 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 CCDC8Q9H0W5 538 aaPredicted RBP15.01□□□□□ -0.01
TGFB1-204ENST00000600196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.01□□□□□ -0.01
TGFB1-204ENST00000600196 SPEF2Q9C093 1822 aa15.01□□□□□ -0.01
TGFB1-204ENST00000600196 MYO3BQ8WXR4 1341 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 CACNA1SQ13698 1873 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
TGFB1-204ENST00000600196 BCAMP50895 628 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 PDE1AP54750 535 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 TTF1Q15361 905 aaPredicted RBP15□□□□□ -0.01
TGFB1-204ENST00000600196 AOC3Q16853 763 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 TXNRD3Q86VQ6 643 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
TGFB1-204ENST00000600196 MRIQ9BWK5 157 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
TGFB1-204ENST00000600196 ARAP2Q8WZ64 1704 aa15□□□□□ -0.01
TGFB1-204ENST00000600196 RIMBP2O15034 1052 aa14.99□□□□□ -0.01
TGFB1-204ENST00000600196 GYG1P46976 350 aa14.99□□□□□ -0.01
TGFB1-204ENST00000600196 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
TGFB1-204ENST00000600196 USP17L3A6NCW0 530 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 USP17L4A6NCW7 530 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 SNAP23O00161 211 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 ECE2O60344 883 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
TGFB1-204ENST00000600196 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
TGFB1-204ENST00000600196 ADORA1P30542 326 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 PHKA1P46020 1223 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 EIF6P56537 245 aaKnown RBP14.98□□□□□ -0.01
TGFB1-204ENST00000600196 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
TGFB1-204ENST00000600196 SPTY2D1Q68D10 685 aaPredicted RBP14.98□□□□□ -0.01
TGFB1-204ENST00000600196 USP17L1Q7RTZ2 530 aa14.98□□□□□ -0.01
TGFB1-204ENST00000600196 SPATA5Q8NB90 893 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms