RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 NEURL1BA8MQ27 555 aa22.04■■□□□ 1.12
SMG9-210ENST00000600097 MMP14P50281 582 aa22.04■■□□□ 1.12
SMG9-210ENST00000600097 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
SMG9-210ENST00000600097 RASAL3Q86YV0 1011 aa22.04■■□□□ 1.12
SMG9-210ENST00000600097 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
SMG9-210ENST00000600097 COA1Q9GZY4 146 aa22.04■■□□□ 1.12
SMG9-210ENST00000600097 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
SMG9-210ENST00000600097 CWF19L2Q2TBE0 894 aaKnown RBP22.03■■□□□ 1.12
SMG9-210ENST00000600097 DACT2Q5SW24 774 aa22.03■■□□□ 1.12
SMG9-210ENST00000600097 STRIP1Q5VSL9 837 aa22.03■■□□□ 1.12
SMG9-210ENST00000600097 LEMD3Q9Y2U8 911 aa22.03■■□□□ 1.12
SMG9-210ENST00000600097 WTIPA6NIX2 430 aaPredicted RBP22.02■■□□□ 1.12
SMG9-210ENST00000600097 H7C1W4 665 aa22.02■■□□□ 1.12
SMG9-210ENST00000600097 IGHMBP2P38935 993 aaKnown RBP22.02■■□□□ 1.12
SMG9-210ENST00000600097 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
SMG9-210ENST00000600097 UBE3BQ7Z3V4 1068 aa22.02■■□□□ 1.12
SMG9-210ENST00000600097 PAPPA2Q9BXP8 1791 aa22.02■■□□□ 1.11
SMG9-210ENST00000600097 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
SMG9-210ENST00000600097 NBPF9Q3BBW0 867 aa22.01■■□□□ 1.11
SMG9-210ENST00000600097 PLA2G12BQ9BX93 195 aa22■■□□□ 1.11
SMG9-210ENST00000600097 ANKRD2Q9GZV1 360 aa22■■□□□ 1.11
SMG9-210ENST00000600097 WNT10BO00744 389 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 NF2P35240 595 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 GCKRQ14397 625 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 G2E3Q7L622 706 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 FBXW7Q969H0 707 aa21.99■■□□□ 1.11
SMG9-210ENST00000600097 AKAP11Q9UKA4 1901 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 SLC34A2O95436 690 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 ITGA6P23229 1130 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 CTU1Q7Z7A3 348 aaKnown RBP21.98■■□□□ 1.11
SMG9-210ENST00000600097 MPHOSPH8Q99549 860 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 MXD3Q9BW11 206 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 MYH16Q9H6N6 1097 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 ZNF804BA4D1E1 1349 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 IL16Q14005 1332 aa21.98■■□□□ 1.11
SMG9-210ENST00000600097 UBE2Q2LH0YL09 131 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 FLIIQ13045 1269 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
SMG9-210ENST00000600097 NCBP3Q53F19 620 aaKnown RBP21.97■■□□□ 1.11
SMG9-210ENST00000600097 TTLL5Q6EMB2 1281 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 MOB2Q70IA6 237 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 TXNRD3Q86VQ6 643 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 SCAF8Q9UPN6 1271 aaKnown RBP21.97■■□□□ 1.11
SMG9-210ENST00000600097 MYH3P11055 1940 aa21.97■■□□□ 1.11
SMG9-210ENST00000600097 CSF1RP07333 972 aa21.96■■□□□ 1.11
SMG9-210ENST00000600097 PRAMEF18Q5VWM3 479 aa21.96■■□□□ 1.11
SMG9-210ENST00000600097 HDAC9Q9UKV0 1011 aa21.96■■□□□ 1.11
SMG9-210ENST00000600097 FKBP5Q13451 457 aaPredicted RBP21.95■■□□□ 1.1
SMG9-210ENST00000600097 LINS1Q8NG48 757 aa21.95■■□□□ 1.1
SMG9-210ENST00000600097 DNAAF4Q8WXU2 420 aa21.95■■□□□ 1.1
SMG9-210ENST00000600097 KCNJ4P48050 445 aa21.94■■□□□ 1.1
SMG9-210ENST00000600097 CASP7P55210 303 aa21.94■■□□□ 1.1
SMG9-210ENST00000600097 APOBEC3FQ8IUX4 373 aaKnown RBP21.94■■□□□ 1.1
SMG9-210ENST00000600097 SASH1O94885 1247 aa21.93■■□□□ 1.1
SMG9-210ENST00000600097 TM4SF4P48230 202 aa21.93■■□□□ 1.1
SMG9-210ENST00000600097 PKN2Q16513 984 aaKnown RBP21.93■■□□□ 1.1
SMG9-210ENST00000600097 ARMC9Q7Z3E5 817 aa21.93■■□□□ 1.1
SMG9-210ENST00000600097 KIAA0825Q8IV33 1275 aa21.93■■□□□ 1.1
SMG9-210ENST00000600097 KLRK1P26718 216 aa21.92■■□□□ 1.1
SMG9-210ENST00000600097 GTF2IP78347 998 aa21.92■■□□□ 1.1
SMG9-210ENST00000600097 CHRNDQ07001 517 aa21.92■■□□□ 1.1
SMG9-210ENST00000600097 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
SMG9-210ENST00000600097 SPEF2Q9C093 1822 aa21.92■■□□□ 1.1
SMG9-210ENST00000600097 ANKRD18BA2A2Z9 1011 aa21.91■■□□□ 1.1
SMG9-210ENST00000600097 SREBF2Q12772 1141 aa21.91■■□□□ 1.1
SMG9-210ENST00000600097 NOM1Q5C9Z4 860 aaKnown RBP21.91■■□□□ 1.1
SMG9-210ENST00000600097 ZBED3Q96IU2 234 aaPredicted RBP21.91■■□□□ 1.1
SMG9-210ENST00000600097 CD209Q9NNX6 404 aa21.91■■□□□ 1.1
SMG9-210ENST00000600097 SOX10P56693 466 aa21.9■■□□□ 1.1
SMG9-210ENST00000600097 FANCIQ9NVI1 1328 aa21.89■■□□□ 1.1
SMG9-210ENST00000600097 TBC1D8O95759 1140 aa21.89■■□□□ 1.09
SMG9-210ENST00000600097 PTPN12Q05209 780 aaKnown RBP21.89■■□□□ 1.09
SMG9-210ENST00000600097 C15orf52Q6ZUT6 534 aaKnown RBP21.89■■□□□ 1.09
SMG9-210ENST00000600097 ZNF296Q8WUU4 475 aaPredicted RBP21.89■■□□□ 1.09
SMG9-210ENST00000600097 ZNF646O15015 1829 aaPredicted RBP21.89■■□□□ 1.09
SMG9-210ENST00000600097 IFIT5Q13325 482 aaKnown RBP21.88■■□□□ 1.09
SMG9-210ENST00000600097 DLGAP5Q15398 846 aa21.88■■□□□ 1.09
SMG9-210ENST00000600097 LDLRAD1Q5T700 205 aa21.88■■□□□ 1.09
SMG9-210ENST00000600097 COL1A1P02452 1464 aaPredicted RBP21.88■■□□□ 1.09
SMG9-210ENST00000600097 GPR25O00155 361 aa21.87■■□□□ 1.09
SMG9-210ENST00000600097 VAMP4O75379 141 aa21.87■■□□□ 1.09
SMG9-210ENST00000600097 WDR63Q8IWG1 891 aa21.87■■□□□ 1.09
SMG9-210ENST00000600097 CFHR5Q9BXR6 569 aa21.87■■□□□ 1.09
SMG9-210ENST00000600097 HPS5Q9UPZ3 1129 aa21.87■■□□□ 1.09
SMG9-210ENST00000600097 MKRN3Q13064 507 aaKnown RBP21.86■■□□□ 1.09
SMG9-210ENST00000600097 PRKG1Q13976 671 aa21.86■■□□□ 1.09
SMG9-210ENST00000600097 ZNF804AQ7Z570 1209 aa21.86■■□□□ 1.09
SMG9-210ENST00000600097 MTMR14Q8NCE2 650 aa21.86■■□□□ 1.09
SMG9-210ENST00000600097 DEFB129Q9H1M3 183 aa21.86■■□□□ 1.09
SMG9-210ENST00000600097 ANGEL1Q9UNK9 670 aaKnown RBP21.86■■□□□ 1.09
SMG9-210ENST00000600097 IRS2Q9Y4H2 1338 aa21.85■■□□□ 1.09
SMG9-210ENST00000600097 TAF5LO75529 589 aa21.85■■□□□ 1.09
SMG9-210ENST00000600097 FOXO4P98177 505 aa21.85■■□□□ 1.09
SMG9-210ENST00000600097 SPRYD7Q5W111 196 aa21.85■■□□□ 1.09
SMG9-210ENST00000600097 PPP2R3BQ9Y5P8 575 aa21.85■■□□□ 1.09
SMG9-210ENST00000600097 MYO1BO43795 1136 aa21.84■■□□□ 1.09
SMG9-210ENST00000600097 ALDH1A1P00352 501 aa21.84■■□□□ 1.09
SMG9-210ENST00000600097 IL1R1P14778 569 aa21.84■■□□□ 1.09
SMG9-210ENST00000600097 INHBEP58166 350 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms