RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 G2E3Q7L622 706 aa15.99■□□□□ 0.15
UPF1-208ENST00000600012 METTL22Q9BUU2 404 aaPredicted RBP15.99■□□□□ 0.15
UPF1-208ENST00000600012 GBA2Q9HCG7 927 aaPredicted RBP15.99■□□□□ 0.15
UPF1-208ENST00000600012 IPO8O15397 1037 aaKnown RBP15.98■□□□□ 0.15
UPF1-208ENST00000600012 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
UPF1-208ENST00000600012 C2orf69Q8N8R5 385 aa15.98■□□□□ 0.15
UPF1-208ENST00000600012 XDHP47989 1333 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 ADM5C9JUS6 153 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 RGMBQ6NW40 437 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 DLK2Q6UY11 383 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 ANKRD18AQ8IVF6 992 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
UPF1-208ENST00000600012 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
UPF1-208ENST00000600012 AGBL3Q8NEM8 1001 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
UPF1-208ENST00000600012 SPEF2Q9C093 1822 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 AKAP11Q9UKA4 1901 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 RSBN1LQ6PCB5 846 aaPredicted RBP15.96■□□□□ 0.15
UPF1-208ENST00000600012 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 CCDC85AQ96PX6 553 aaPredicted RBP15.96■□□□□ 0.15
UPF1-208ENST00000600012 ZIC5Q96T25 663 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
UPF1-208ENST00000600012 FAM155AB1AL88 458 aaPredicted RBP15.95■□□□□ 0.14
UPF1-208ENST00000600012 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
UPF1-208ENST00000600012 ZNF280AP59817 542 aaPredicted RBP15.95■□□□□ 0.14
UPF1-208ENST00000600012 FLIIQ13045 1269 aa15.95■□□□□ 0.14
UPF1-208ENST00000600012 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
UPF1-208ENST00000600012 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
UPF1-208ENST00000600012 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
UPF1-208ENST00000600012 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
UPF1-208ENST00000600012 PTPRCP08575 1304 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 MS4A1P11836 297 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 CTSWP56202 376 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 MCOLN1Q9GZU1 580 aa15.94■□□□□ 0.14
UPF1-208ENST00000600012 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
UPF1-208ENST00000600012 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 ZNF157P51786 506 aaPredicted RBP15.93■□□□□ 0.14
UPF1-208ENST00000600012 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 CDCA5Q96FF9 252 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 SAGE1Q9NXZ1 904 aa15.93■□□□□ 0.14
UPF1-208ENST00000600012 PAPPA2Q9BXP8 1791 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 USP17L3A6NCW0 530 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 USP17L4A6NCW7 530 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 USP17L8P0C7I0 530 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 KIF23Q02241 960 aaPredicted RBP15.92■□□□□ 0.14
UPF1-208ENST00000600012 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
UPF1-208ENST00000600012 SCARF1Q14162 830 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
UPF1-208ENST00000600012 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
UPF1-208ENST00000600012 USP17L1Q7RTZ2 530 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 TTLL11Q8NHH1 800 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 GMLQ99445 158 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 PITPNM2Q9BZ72 1349 aa15.92■□□□□ 0.14
UPF1-208ENST00000600012 F6X3S4 739 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 SLC10A3P09131 477 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 RGS19P49795 217 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 DGKZQ13574 1117 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 MYOZ2Q9NPC6 264 aa15.91■□□□□ 0.14
UPF1-208ENST00000600012 BSDC1Q9NW68 430 aaPredicted RBP15.91■□□□□ 0.14
UPF1-208ENST00000600012 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
UPF1-208ENST00000600012 FKBP1BP68106 108 aa15.9■□□□□ 0.14
UPF1-208ENST00000600012 MLLT1Q03111 559 aaPredicted RBP15.9■□□□□ 0.14
UPF1-208ENST00000600012 GREM2Q9H772 168 aa15.9■□□□□ 0.14
UPF1-208ENST00000600012 MINPP1Q9UNW1 487 aa15.9■□□□□ 0.14
UPF1-208ENST00000600012 NEURL1BA8MQ27 555 aa15.89■□□□□ 0.13
UPF1-208ENST00000600012 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
UPF1-208ENST00000600012 CWF19L2Q2TBE0 894 aaKnown RBP15.89■□□□□ 0.13
UPF1-208ENST00000600012 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
UPF1-208ENST00000600012 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
UPF1-208ENST00000600012 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
UPF1-208ENST00000600012 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
UPF1-208ENST00000600012 RNF186Q9NXI6 227 aa15.88■□□□□ 0.13
UPF1-208ENST00000600012 MYO3BQ8WXR4 1341 aa15.88■□□□□ 0.13
UPF1-208ENST00000600012 H7C1W4 665 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 TRPA1O75762 1119 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 IGHMBP2P38935 993 aaKnown RBP15.87■□□□□ 0.13
UPF1-208ENST00000600012 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 RASAL3Q86YV0 1011 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 OGFOD1Q8N543 542 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 CSRNP1Q96S65 589 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 LEMD3Q9Y2U8 911 aa15.87■□□□□ 0.13
UPF1-208ENST00000600012 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
UPF1-208ENST00000600012 MMP14P50281 582 aa15.86■□□□□ 0.13
UPF1-208ENST00000600012 STRIP1Q5VSL9 837 aa15.86■□□□□ 0.13
UPF1-208ENST00000600012 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
UPF1-208ENST00000600012 B4GALNT3Q6L9W6 998 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms