RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, human

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-208	ENST00000599264	SETDB1	Q15047	1291 aa		11.23	□□□□□ -0.61
LINC00343-208	ENST00000599264	C1orf127	Q8N9H9	656 aa		11.23	□□□□□ -0.61
LINC00343-208	ENST00000599264	EIF4G1	Q04637	1599 aa	Known RBP	11.22	□□□□□ -0.61
LINC00343-208	ENST00000599264	TMEM130	Q8N3G9	435 aa		11.22	□□□□□ -0.61
LINC00343-208	ENST00000599264	MYO15B	Q96JP2	1530 aa		11.22	□□□□□ -0.61
LINC00343-208	ENST00000599264	AKTIP	Q9H8T0	292 aa		11.22	□□□□□ -0.61
LINC00343-208	ENST00000599264	SALL4	Q9UJQ4	1053 aa		11.22	□□□□□ -0.61
LINC00343-208	ENST00000599264	LINC01387	J3KSC0	135 aa		11.21	□□□□□ -0.61
LINC00343-208	ENST00000599264	NOS3	P29474	1203 aa		11.21	□□□□□ -0.61
LINC00343-208	ENST00000599264	CABP4	P57796	275 aa		11.21	□□□□□ -0.61
LINC00343-208	ENST00000599264	EGFL7	Q9UHF1	273 aa		11.21	□□□□□ -0.61
LINC00343-208	ENST00000599264		A6NHS1	94 aa		11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	SUPT5H	O00267	1087 aa	Known RBP	11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	PHACTR2	O75167	634 aa		11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	ZNF211	Q13398	564 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	SNX29	Q8TEQ0	813 aa		11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00343-208	ENST00000599264	POP1	Q99575	1024 aa	Known RBP	11.19	□□□□□ -0.62
LINC00343-208	ENST00000599264	ANO2	Q9NQ90	1003 aa		11.19	□□□□□ -0.62
LINC00343-208	ENST00000599264	EDN3	P14138	238 aa		11.18	□□□□□ -0.62
LINC00343-208	ENST00000599264	CD68	P34810	354 aa	Predicted RBP	11.18	□□□□□ -0.62
LINC00343-208	ENST00000599264	KLHL23	Q8NBE8	558 aa		11.18	□□□□□ -0.62
LINC00343-208	ENST00000599264	ADAM19	Q9H013	955 aa		11.18	□□□□□ -0.62
LINC00343-208	ENST00000599264		F8W735	103 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	FZD6	O60353	706 aa		11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	TNFRSF21	O75509	655 aa		11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	CDC25B	P30305	580 aa		11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	ZMYM1	Q5SVZ6	1142 aa		11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	DZANK1	Q9NVP4	752 aa		11.17	□□□□□ -0.62
LINC00343-208	ENST00000599264	PDE2A	O00408	941 aa	Predicted RBP	11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	FSCN2	O14926	492 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	ICMT	O60725	284 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	ITGB7	P26010	798 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	PRSS36	Q5K4E3	855 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	TXNDC11	Q6PKC3	985 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	GLYCTK	Q8IVS8	523 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	WNT8B	Q93098	351 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264	CHRD	Q9H2X0	955 aa		11.16	□□□□□ -0.62
LINC00343-208	ENST00000599264		H3BRJ5	948 aa		11.15	□□□□□ -0.62
LINC00343-208	ENST00000599264	MEGF10	Q96KG7	1140 aa		11.15	□□□□□ -0.62
LINC00343-208	ENST00000599264	SEC31B	Q9NQW1	1179 aa		11.15	□□□□□ -0.62
LINC00343-208	ENST00000599264	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC00343-208	ENST00000599264	BRPF3	Q9ULD4	1205 aa		11.15	□□□□□ -0.62
LINC00343-208	ENST00000599264	EPHA1	P21709	976 aa		11.14	□□□□□ -0.63
LINC00343-208	ENST00000599264	GJD3	Q8N144	294 aa		11.14	□□□□□ -0.63
LINC00343-208	ENST00000599264	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00343-208	ENST00000599264	GALNT11	Q8NCW6	608 aa		11.14	□□□□□ -0.63
LINC00343-208	ENST00000599264	CCDC87	Q9NVE4	849 aa		11.14	□□□□□ -0.63
LINC00343-208	ENST00000599264		H3BRB1	525 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	EREG	O14944	169 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	ALX3	O95076	343 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	ARL4D	P49703	201 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	PIP4K2B	P78356	416 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	DZIP1L	Q8IYY4	767 aa	Known RBP	11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	OSMR	Q99650	979 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	TUT1	Q9H6E5	874 aa	Known RBP	11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	AMOTL2	Q9Y2J4	779 aa		11.13	□□□□□ -0.63
LINC00343-208	ENST00000599264	NFKBIE	O00221	500 aa		11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	NEFL	P07196	543 aa		11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	GLB1	P16278	677 aa		11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	CARD10	Q9BWT7	1032 aa		11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	OSGEP	Q9NPF4	335 aa		11.12	□□□□□ -0.63
LINC00343-208	ENST00000599264	ACPP	P15309	386 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	SERPINB4	P48594	390 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	DUOXA2	Q1HG44	320 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	ACAD11	Q709F0	780 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264		Q8N3U1	123 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	CEP41	Q9BYV8	373 aa		11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC00343-208	ENST00000599264	NDUFB5	O43674	189 aa		11.1	□□□□□ -0.63
LINC00343-208	ENST00000599264	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00343-208	ENST00000599264	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00343-208	ENST00000599264	RETREG2	Q8NC44	543 aa		11.1	□□□□□ -0.63
LINC00343-208	ENST00000599264	SCO2	A0A1W2PP80	73 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	ADAMTSL4	Q6UY14	1074 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	PRR23C	Q6ZRP0	262 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264		Q6ZS46	218 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	AGGF1	Q8N302	714 aa	eCLIP	11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	CCER1	Q8TC90	406 aa	Predicted RBP	11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	BSND	Q8WZ55	320 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	NXPE3	Q969Y0	559 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	ZKSCAN3	Q9BRR0	538 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	ZFYVE28	Q9HCC9	887 aa		11.09	□□□□□ -0.63
LINC00343-208	ENST00000599264	TRPA1	O75762	1119 aa		11.08	□□□□□ -0.64
LINC00343-208	ENST00000599264	PDE3B	Q13370	1112 aa		11.08	□□□□□ -0.64
LINC00343-208	ENST00000599264	KLHDC7B	Q96G42	594 aa		11.08	□□□□□ -0.64
LINC00343-208	ENST00000599264	SOX13	Q9UN79	622 aa		11.08	□□□□□ -0.64
LINC00343-208	ENST00000599264	CUX2	O14529	1486 aa		11.07	□□□□□ -0.64
LINC00343-208	ENST00000599264	SLC51A	Q86UW1	340 aa		11.07	□□□□□ -0.64
LINC00343-208	ENST00000599264	SLC7A3	Q8WY07	619 aa		11.07	□□□□□ -0.64
LINC00343-208	ENST00000599264	KCNK4	Q9NYG8	393 aa		11.07	□□□□□ -0.64
LINC00343-208	ENST00000599264	C19orf57	Q0VDD7	668 aa		11.06	□□□□□ -0.64
LINC00343-208	ENST00000599264	HHIP	Q96QV1	700 aa		11.06	□□□□□ -0.64
LINC00343-208	ENST00000599264	CITED4	Q96RK1	184 aa		11.06	□□□□□ -0.64
LINC00343-208	ENST00000599264	EIF4EBP3	O60516	100 aa	Predicted RBP	11.05	□□□□□ -0.64
LINC00343-208	ENST00000599264	WISP1	O95388	367 aa		11.05	□□□□□ -0.64
LINC00343-208	ENST00000599264	IKBKE	Q14164	716 aa		11.05	□□□□□ -0.64
LINC00343-208	ENST00000599264	TXNDC2	Q86VQ3	553 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms