RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 USP17L8P0C7I0 530 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 CDC37L1Q7L3B6 337 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 TXNRD3Q86VQ6 643 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 PGAP2Q9UHJ9 254 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
XRCC1-208ENST00000598422 KIF16BQ96L93 1317 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 ZNF609O15014 1411 aa18.38■□□□□ 0.53
XRCC1-208ENST00000598422 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
XRCC1-208ENST00000598422 FMR1Q06787 632 aaKnown RBP eCLIP18.37■□□□□ 0.53
XRCC1-208ENST00000598422 PAXIP1Q6ZW49 1069 aaPredicted RBP18.37■□□□□ 0.53
XRCC1-208ENST00000598422 ZNF804AQ7Z570 1209 aa18.37■□□□□ 0.53
XRCC1-208ENST00000598422 DCPSQ96C86 337 aaKnown RBP18.37■□□□□ 0.53
XRCC1-208ENST00000598422 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
XRCC1-208ENST00000598422 ZNF408Q9H9D4 720 aa18.37■□□□□ 0.53
XRCC1-208ENST00000598422 MYO3BQ8WXR4 1341 aa18.37■□□□□ 0.53
XRCC1-208ENST00000598422 CELF2O95319 508 aaKnown RBP18.36■□□□□ 0.53
XRCC1-208ENST00000598422 EGFRP00533 1210 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-208ENST00000598422 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-208ENST00000598422 RABL6Q3YEC7 729 aaPredicted RBP18.36■□□□□ 0.53
XRCC1-208ENST00000598422 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 KRT26Q7Z3Y9 468 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 OGFOD1Q8N543 542 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 USP44Q9H0E7 712 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 GGA3Q9NZ52 723 aa18.36■□□□□ 0.53
XRCC1-208ENST00000598422 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 RASSF10A6NK89 507 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 SNAP23O00161 211 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 UBTFL1P0CB47 393 aaPredicted RBP18.35■□□□□ 0.53
XRCC1-208ENST00000598422 DEFB115Q30KQ5 88 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 TTLL5Q6EMB2 1281 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 USP48Q86UV5 1035 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 SULF1Q8IWU6 871 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 ANKRD44Q8N8A2 993 aa18.35■□□□□ 0.53
XRCC1-208ENST00000598422 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
XRCC1-208ENST00000598422 GMLQ99445 158 aa18.34■□□□□ 0.53
XRCC1-208ENST00000598422 CD209Q9NNX6 404 aa18.34■□□□□ 0.53
XRCC1-208ENST00000598422 MYOZ2Q9NPC6 264 aa18.34■□□□□ 0.53
XRCC1-208ENST00000598422 HDAC5Q9UQL6 1122 aa18.34■□□□□ 0.53
XRCC1-208ENST00000598422 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.53
XRCC1-208ENST00000598422 HSPA1AP0DMV8 641 aaKnown RBP18.33■□□□□ 0.52
XRCC1-208ENST00000598422 HSPA1BP0DMV9 641 aaKnown RBP18.33■□□□□ 0.52
XRCC1-208ENST00000598422 VEGFBP49765 207 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 GTF2IP78347 998 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 METTL24Q5JXM2 366 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 CST9Q5W186 159 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 MXD3Q9BW11 206 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.52
XRCC1-208ENST00000598422 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
XRCC1-208ENST00000598422 IPO8O15397 1037 aaKnown RBP18.32■□□□□ 0.52
XRCC1-208ENST00000598422 GRM1Q13255 1194 aa18.32■□□□□ 0.52
XRCC1-208ENST00000598422 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
XRCC1-208ENST00000598422 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
XRCC1-208ENST00000598422 ECE1P42892 770 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 UBE4AQ14139 1066 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 SCARF1Q14162 830 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
XRCC1-208ENST00000598422 KIAA0825Q8IV33 1275 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
XRCC1-208ENST00000598422 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-208ENST00000598422 IRS2Q9Y4H2 1338 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 MMP14P50281 582 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-208ENST00000598422 AIDAQ96BJ3 306 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 CAPNS2Q96L46 248 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
XRCC1-208ENST00000598422 WDR33Q9C0J8 1336 aaKnown RBP18.29■□□□□ 0.52
XRCC1-208ENST00000598422 IL1R1P14778 569 aa18.29■□□□□ 0.52
XRCC1-208ENST00000598422 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
XRCC1-208ENST00000598422 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
XRCC1-208ENST00000598422 HIBADHP31937 336 aaKnown RBP18.28■□□□□ 0.52
XRCC1-208ENST00000598422 CYP4F22Q6NT55 531 aa18.28■□□□□ 0.52
XRCC1-208ENST00000598422 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
XRCC1-208ENST00000598422 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
XRCC1-208ENST00000598422 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 PITPNM2Q9BZ72 1349 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 BCAR3O75815 825 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 SASH1O94885 1247 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 GYG1P46976 350 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 DLK2Q6UY11 383 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 MEIS3Q99687 375 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 GBA2Q9HCG7 927 aaPredicted RBP18.27■□□□□ 0.52
XRCC1-208ENST00000598422 JAG2Q9Y219 1238 aa18.27■□□□□ 0.52
XRCC1-208ENST00000598422 EYA2O00167 538 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 GNAI3P08754 354 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 TRIM27P14373 513 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 HUNKP57058 714 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
XRCC1-208ENST00000598422 INTS3Q68E01 1043 aaKnown RBP18.26■□□□□ 0.51
XRCC1-208ENST00000598422 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
XRCC1-208ENST00000598422 WNT10BO00744 389 aa18.25■□□□□ 0.51
XRCC1-208ENST00000598422 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
XRCC1-208ENST00000598422 PDE8BO95263 885 aa18.25■□□□□ 0.51
XRCC1-208ENST00000598422 FKBP1AP62942 108 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms