RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 RSBN1LQ6PCB5 846 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-203ENST00000598359 USP48Q86UV5 1035 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 SUCLG2Q96I99 432 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 ZNF408Q9H9D4 720 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
SCAF1-203ENST00000598359 ASTN2O75129 1339 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-203ENST00000598359 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 CELF2O95319 508 aaKnown RBP17.41■□□□□ 0.38
SCAF1-203ENST00000598359 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-203ENST00000598359 RGS19P49795 217 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 GRM1Q13255 1194 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 ZC3H15Q8WU90 426 aaKnown RBP17.41■□□□□ 0.38
SCAF1-203ENST00000598359 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 ANKRD2Q9GZV1 360 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
SCAF1-203ENST00000598359 USP17L3A6NCW0 530 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 USP17L4A6NCW7 530 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 KCNJ4P48050 445 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 KIF4BQ2VIQ3 1234 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
SCAF1-203ENST00000598359 USP17L1Q7RTZ2 530 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 TRMT2AQ8IZ69 625 aaKnown RBP17.4■□□□□ 0.38
SCAF1-203ENST00000598359 GMLQ99445 158 aa17.4■□□□□ 0.38
SCAF1-203ENST00000598359 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
SCAF1-203ENST00000598359 ADM5C9JUS6 153 aa17.39■□□□□ 0.37
SCAF1-203ENST00000598359 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
SCAF1-203ENST00000598359 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.37
SCAF1-203ENST00000598359 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 PSME4Q14997 1843 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 PLIN1O60240 522 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-203ENST00000598359 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 KRT26Q7Z3Y9 468 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 COA1Q9GZY4 146 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 GGA3Q9NZ52 723 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 PTPRCP08575 1304 aa17.38■□□□□ 0.37
SCAF1-203ENST00000598359 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
SCAF1-203ENST00000598359 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-203ENST00000598359 USP17L8P0C7I0 530 aa17.37■□□□□ 0.37
SCAF1-203ENST00000598359 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-203ENST00000598359 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
SCAF1-203ENST00000598359 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
SCAF1-203ENST00000598359 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
SCAF1-203ENST00000598359 TLL2Q9Y6L7 1015 aa17.37■□□□□ 0.37
SCAF1-203ENST00000598359 A0A1B0GUL6 1792 aa17.37■□□□□ 0.37
SCAF1-203ENST00000598359 ZNF646O15015 1829 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-203ENST00000598359 SCARF1Q14162 830 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
SCAF1-203ENST00000598359 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
SCAF1-203ENST00000598359 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 SCAF8Q9UPN6 1271 aaKnown RBP17.36■□□□□ 0.37
SCAF1-203ENST00000598359 CASP8AP2Q9UKL3 1982 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 UTYO14607 1347 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 IRS2Q9Y4H2 1338 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 ZNF609O15014 1411 aa17.36■□□□□ 0.37
SCAF1-203ENST00000598359 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
SCAF1-203ENST00000598359 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
SCAF1-203ENST00000598359 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
SCAF1-203ENST00000598359 AOC2O75106 756 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 GTF2IP78347 998 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 STRIP1Q5VSL9 837 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 ANKRD44Q8N8A2 993 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
SCAF1-203ENST00000598359 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.36
SCAF1-203ENST00000598359 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
SCAF1-203ENST00000598359 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.36
SCAF1-203ENST00000598359 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
SCAF1-203ENST00000598359 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
SCAF1-203ENST00000598359 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
SCAF1-203ENST00000598359 KIAA0825Q8IV33 1275 aa17.32■□□□□ 0.36
SCAF1-203ENST00000598359 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
SCAF1-203ENST00000598359 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
SCAF1-203ENST00000598359 SASH1O94885 1247 aa17.31■□□□□ 0.36
SCAF1-203ENST00000598359 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
SCAF1-203ENST00000598359 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
SCAF1-203ENST00000598359 CERS5Q8N5B7 392 aa17.31■□□□□ 0.36
SCAF1-203ENST00000598359 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
SCAF1-203ENST00000598359 ECE1P42892 770 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 HUNKP57058 714 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
SCAF1-203ENST00000598359 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 CDCA5Q96FF9 252 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 GBA2Q9HCG7 927 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-203ENST00000598359 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
SCAF1-203ENST00000598359 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
SCAF1-203ENST00000598359 GYG1P46976 350 aa17.29■□□□□ 0.36
SCAF1-203ENST00000598359 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SCAF1-203ENST00000598359 PRAMEF18Q5VWM3 479 aa17.29■□□□□ 0.36
SCAF1-203ENST00000598359 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms