RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 KIF4BQ2VIQ3 1234 aa29.09■■■□□ 2.25
SSBP4-205ENST00000598159 ALDH1L2Q3SY69 923 aa29.09■■■□□ 2.25
SSBP4-205ENST00000598159 DCPSQ96C86 337 aaKnown RBP29.09■■■□□ 2.25
SSBP4-205ENST00000598159 POLR2AP24928 1970 aaKnown RBP29.09■■■□□ 2.25
SSBP4-205ENST00000598159 WDR33Q9C0J8 1336 aaKnown RBP29.09■■■□□ 2.25
SSBP4-205ENST00000598159 PCNTO95613 3336 aa29.08■■■□□ 2.25
SSBP4-205ENST00000598159 TXNRD3Q86VQ6 643 aa29.08■■■□□ 2.25
SSBP4-205ENST00000598159 UTYO14607 1347 aa29.07■■■□□ 2.24
SSBP4-205ENST00000598159 USP17L8P0C7I0 530 aa29.07■■■□□ 2.24
SSBP4-205ENST00000598159 ECE1P42892 770 aa29.07■■■□□ 2.24
SSBP4-205ENST00000598159 STRIP1Q5VSL9 837 aa29.07■■■□□ 2.24
SSBP4-205ENST00000598159 TAF7LQ5H9L4 462 aa29.06■■■□□ 2.24
SSBP4-205ENST00000598159 LDHAL6AQ6ZMR3 332 aa29.06■■■□□ 2.24
SSBP4-205ENST00000598159 KRT26Q7Z3Y9 468 aa29.06■■■□□ 2.24
SSBP4-205ENST00000598159 CT47B1P0C2W7 299 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-205ENST00000598159 COL13A1Q5TAT6 717 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-205ENST00000598159 SAPCD2Q86UD0 394 aa29.05■■■□□ 2.24
SSBP4-205ENST00000598159 NBPF7P0C2Y1 421 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-205ENST00000598159 MMP14P50281 582 aa29.04■■■□□ 2.24
SSBP4-205ENST00000598159 DACT2Q5SW24 774 aa29.04■■■□□ 2.24
SSBP4-205ENST00000598159 C15orf52Q6ZUT6 534 aaKnown RBP29.04■■■□□ 2.24
SSBP4-205ENST00000598159 SUCLG2Q96I99 432 aa29.04■■■□□ 2.24
SSBP4-205ENST00000598159 HHIPL1Q96JK4 782 aa29.04■■■□□ 2.24
SSBP4-205ENST00000598159 ZNF408Q9H9D4 720 aa29.04■■■□□ 2.24
SSBP4-205ENST00000598159 MYO3BQ8WXR4 1341 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 TAF5LO75529 589 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 TTLL5Q6EMB2 1281 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 PAXIP1Q6ZW49 1069 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-205ENST00000598159 HELBQ8NG08 1087 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-205ENST00000598159 KAZALD1Q96I82 304 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 ZNF594Q96JF6 807 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-205ENST00000598159 CAPNS2Q96L46 248 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 MYOZ2Q9NPC6 264 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 WBP1LQ9NX94 342 aa29.03■■■□□ 2.24
SSBP4-205ENST00000598159 MAP2K1Q02750 393 aaPredicted RBP29.02■■■□□ 2.24
SSBP4-205ENST00000598159 SCARF1Q14162 830 aa29.02■■■□□ 2.24
SSBP4-205ENST00000598159 OGFOD1Q8N543 542 aa29.02■■■□□ 2.24
SSBP4-205ENST00000598159 AIDAQ96BJ3 306 aa29.02■■■□□ 2.24
SSBP4-205ENST00000598159 CNNM1Q9NRU3 951 aa29.02■■■□□ 2.24
SSBP4-205ENST00000598159 KLRK1P26718 216 aa29.01■■■□□ 2.23
SSBP4-205ENST00000598159 CYP4F22Q6NT55 531 aa29.01■■■□□ 2.23
SSBP4-205ENST00000598159 SULF1Q8IWU6 871 aa29.01■■■□□ 2.23
SSBP4-205ENST00000598159 FBXW7Q969H0 707 aa29.01■■■□□ 2.23
SSBP4-205ENST00000598159 CD209Q9NNX6 404 aa29.01■■■□□ 2.23
SSBP4-205ENST00000598159 SMC4Q9NTJ3 1288 aa29■■■□□ 2.23
SSBP4-205ENST00000598159 GGA3Q9NZ52 723 aa29■■■□□ 2.23
SSBP4-205ENST00000598159 SNAP23O00161 211 aa28.98■■■□□ 2.23
SSBP4-205ENST00000598159 FOXN1O15353 648 aa28.98■■■□□ 2.23
SSBP4-205ENST00000598159 GTF2IP78347 998 aa28.98■■■□□ 2.23
SSBP4-205ENST00000598159 MXD3Q9BW11 206 aa28.98■■■□□ 2.23
SSBP4-205ENST00000598159 IRS2Q9Y4H2 1338 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 ADM5C9JUS6 153 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 PLIN1O60240 522 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 MAP2K2P36507 400 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 RABL6Q3YEC7 729 aaPredicted RBP28.97■■■□□ 2.23
SSBP4-205ENST00000598159 DLK2Q6UY11 383 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 USP44Q9H0E7 712 aa28.97■■■□□ 2.23
SSBP4-205ENST00000598159 BICC1Q9H694 974 aaKnown RBP28.97■■■□□ 2.23
SSBP4-205ENST00000598159 ASTN2O75129 1339 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-205ENST00000598159 CTCFP49711 727 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-205ENST00000598159 GRM1Q13255 1194 aa28.96■■■□□ 2.23
SSBP4-205ENST00000598159 ANGEL2Q5VTE6 544 aaKnown RBP28.96■■■□□ 2.23
SSBP4-205ENST00000598159 ZNF804AQ7Z570 1209 aa28.96■■■□□ 2.23
SSBP4-205ENST00000598159 C2orf69Q8N8R5 385 aa28.96■■■□□ 2.23
SSBP4-205ENST00000598159 PITPNM2Q9BZ72 1349 aa28.95■■■□□ 2.23
SSBP4-205ENST00000598159 BRPF1P55201 1214 aaPredicted RBP28.95■■■□□ 2.22
SSBP4-205ENST00000598159 HDAC9Q9UKV0 1011 aa28.95■■■□□ 2.22
SSBP4-205ENST00000598159 IL1R1P14778 569 aa28.94■■■□□ 2.22
SSBP4-205ENST00000598159 UBE4AQ14139 1066 aa28.94■■■□□ 2.22
SSBP4-205ENST00000598159 GBA2Q9HCG7 927 aaPredicted RBP28.94■■■□□ 2.22
SSBP4-205ENST00000598159 RIPOR2Q9Y4F9 1068 aa28.94■■■□□ 2.22
SSBP4-205ENST00000598159 HUNKP57058 714 aa28.93■■■□□ 2.22
SSBP4-205ENST00000598159 PUS3Q9BZE2 481 aaKnown RBP28.93■■■□□ 2.22
SSBP4-205ENST00000598159 PRDM10Q9NQV6 1147 aa28.93■■■□□ 2.22
SSBP4-205ENST00000598159 ZNF646O15015 1829 aaPredicted RBP28.92■■■□□ 2.22
SSBP4-205ENST00000598159 ANKRD44Q8N8A2 993 aa28.92■■■□□ 2.22
SSBP4-205ENST00000598159 BEGAINQ9BUH8 593 aa28.92■■■□□ 2.22
SSBP4-205ENST00000598159 NOB1Q9ULX3 412 aaKnown RBP28.92■■■□□ 2.22
SSBP4-205ENST00000598159 A0A1B0GUL6 1792 aa28.92■■■□□ 2.22
SSBP4-205ENST00000598159 MROH5Q6ZUA9 1318 aa28.92■■■□□ 2.22
SSBP4-205ENST00000598159 WNT10BO00744 389 aa28.91■■■□□ 2.22
SSBP4-205ENST00000598159 NBPF9Q3BBW0 867 aa28.91■■■□□ 2.22
SSBP4-205ENST00000598159 KIAA0825Q8IV33 1275 aa28.91■■■□□ 2.22
SSBP4-205ENST00000598159 TNS4Q8IZW8 715 aa28.91■■■□□ 2.22
SSBP4-205ENST00000598159 CDCA5Q96FF9 252 aa28.91■■■□□ 2.22
SSBP4-205ENST00000598159 FKBP1AP62942 108 aaKnown RBP28.9■■■□□ 2.22
SSBP4-205ENST00000598159 API5Q9BZZ5 524 aaKnown RBP28.9■■■□□ 2.22
SSBP4-205ENST00000598159 AOC2O75106 756 aa28.89■■■□□ 2.22
SSBP4-205ENST00000598159 SASH1O94885 1247 aa28.88■■■□□ 2.21
SSBP4-205ENST00000598159 DIEXFQ68CQ4 756 aaKnown RBP28.88■■■□□ 2.21
SSBP4-205ENST00000598159 RGMBQ6NW40 437 aa28.88■■■□□ 2.21
SSBP4-205ENST00000598159 RARSP54136 660 aaKnown RBP28.87■■■□□ 2.21
SSBP4-205ENST00000598159 THSD7BQ9C0I4 1608 aa28.87■■■□□ 2.21
SSBP4-205ENST00000598159 HIBADHP31937 336 aaKnown RBP28.86■■■□□ 2.21
SSBP4-205ENST00000598159 LBX1P52954 281 aa28.86■■■□□ 2.21
SSBP4-205ENST00000598159 NOGQ13253 232 aa28.86■■■□□ 2.21
SSBP4-205ENST00000598159 MIER1Q8N108 512 aa28.86■■■□□ 2.21
SSBP4-205ENST00000598159 CCDC102AQ96A19 550 aa28.86■■■□□ 2.21
SSBP4-205ENST00000598159 HDAC5Q9UQL6 1122 aa28.86■■■□□ 2.21
SSBP4-205ENST00000598159 FKBP1BP68106 108 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms