RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 POLLQ9UGP5 575 aa10.98□□□□□ -0.65
FARP1-217ENST00000596467 NSFL1CQ9UNZ2 370 aaKnown RBP10.98□□□□□ -0.65
FARP1-217ENST00000596467 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
FARP1-217ENST00000596467 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
FARP1-217ENST00000596467 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
FARP1-217ENST00000596467 DLL1O00548 723 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 HCLS1P14317 486 aaPredicted RBP10.97□□□□□ -0.65
FARP1-217ENST00000596467 OTOP1Q7RTM1 612 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 NLRP10Q86W26 655 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 SH3TC1Q8TE82 1336 aa10.97□□□□□ -0.65
FARP1-217ENST00000596467 COL4A1P02462 1669 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 UBE2Q2LH0YL09 131 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 INHBEP58166 350 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 MOB2Q70IA6 237 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 ARMC5Q96C12 935 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 CFAP53Q96M91 514 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 R3HDMLQ9H3Y0 253 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 TRIM17Q9Y577 477 aa10.96□□□□□ -0.65
FARP1-217ENST00000596467 LAMA3Q16787 3333 aa10.96□□□□□ -0.66
FARP1-217ENST00000596467 PDIA6Q15084 440 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 SF3B3Q15393 1217 aaKnown RBP10.95□□□□□ -0.66
FARP1-217ENST00000596467 DOK7Q18PE1 504 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 RSBN1LQ6PCB5 846 aaPredicted RBP10.95□□□□□ -0.66
FARP1-217ENST00000596467 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 DCBLD2Q96PD2 775 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 GMLQ99445 158 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
FARP1-217ENST00000596467 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 TRMT112Q9UI30 125 aaKnown RBP10.95□□□□□ -0.66
FARP1-217ENST00000596467 PTPN22Q9Y2R2 807 aa10.95□□□□□ -0.66
FARP1-217ENST00000596467 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 EN2P19622 333 aaPredicted RBP10.94□□□□□ -0.66
FARP1-217ENST00000596467 NF2P35240 595 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 GPSM2P81274 684 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 TCIRG1Q13488 830 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 CELF1Q92879 486 aaKnown RBP10.94□□□□□ -0.66
FARP1-217ENST00000596467 MYOZ2Q9NPC6 264 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 MYH3P11055 1940 aa10.94□□□□□ -0.66
FARP1-217ENST00000596467 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
FARP1-217ENST00000596467 PSEN1P49768 467 aa10.93□□□□□ -0.66
FARP1-217ENST00000596467 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
FARP1-217ENST00000596467 ERO1AQ96HE7 468 aa10.93□□□□□ -0.66
FARP1-217ENST00000596467 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
FARP1-217ENST00000596467 MANSC4A6NHS7 340 aaPredicted RBP10.92□□□□□ -0.66
FARP1-217ENST00000596467 MMP14P50281 582 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 CLCN6P51797 869 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
FARP1-217ENST00000596467 LDLRAD1Q5T700 205 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
FARP1-217ENST00000596467 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
FARP1-217ENST00000596467 G3V3G9 751 aa10.91□□□□□ -0.66
FARP1-217ENST00000596467 ZBTB48P10074 688 aaPredicted RBP10.91□□□□□ -0.66
FARP1-217ENST00000596467 RPS8P62241 208 aaKnown RBP10.91□□□□□ -0.66
FARP1-217ENST00000596467 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
FARP1-217ENST00000596467 ARMC9Q7Z3E5 817 aa10.91□□□□□ -0.66
FARP1-217ENST00000596467 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
FARP1-217ENST00000596467 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
FARP1-217ENST00000596467 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
FARP1-217ENST00000596467 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.66
FARP1-217ENST00000596467 PROSER3Q2NL68 480 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 NBPF9Q3BBW0 867 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 PRAMEF18Q5VWM3 479 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 COPS6Q7L5N1 327 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 PODNQ7Z5L7 613 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
FARP1-217ENST00000596467 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 H0YGN5 161 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 WNT10BO00744 389 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 MAP3K11Q16584 847 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 USP17L1Q7RTZ2 530 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 GGA1Q9UJY5 639 aa10.89□□□□□ -0.67
FARP1-217ENST00000596467 MYO3BQ8WXR4 1341 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 IGF2BP3O00425 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
FARP1-217ENST00000596467 UFL1O94874 794 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 NEFMP07197 916 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
FARP1-217ENST00000596467 SP3Q02447 781 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 OGFOD1Q8N543 542 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 XAGE3Q8WTP9 111 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 ANKIB1Q9P2G1 1089 aa10.88□□□□□ -0.67
FARP1-217ENST00000596467 SCAF8Q9UPN6 1271 aaKnown RBP10.88□□□□□ -0.67
FARP1-217ENST00000596467 ANXA1P04083 346 aa10.87□□□□□ -0.67
FARP1-217ENST00000596467 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms