RNA–Protein interactions for RNA: ENST00000596319.1

SAMD4B-205, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-205ENST00000596319 ZNF408Q9H9D4 720 aa13.27□□□□□ -0.29
SAMD4B-205ENST00000596319 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 CAPN15O75808 1086 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 ITGA6P23229 1130 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 GRM1Q13255 1194 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 PSME4Q14997 1843 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
SAMD4B-205ENST00000596319 AOC2O75106 756 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 DLK2Q6UY11 383 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
SAMD4B-205ENST00000596319 CA12O43570 354 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 BRPF1P55201 1214 aaPredicted RBP13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 HUNKP57058 714 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 SULF1Q8IWU6 871 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 GBA2Q9HCG7 927 aaPredicted RBP13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 GGA3Q9NZ52 723 aa13.24□□□□□ -0.29
SAMD4B-205ENST00000596319 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 MMP14P50281 582 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 NOGQ13253 232 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 SCARF1Q14162 830 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 STRIP1Q5VSL9 837 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
SAMD4B-205ENST00000596319 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 F6X3S4 739 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 FOXO4P98177 505 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
SAMD4B-205ENST00000596319 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 CHRNDQ07001 517 aa13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 IFIT5Q13325 482 aaKnown RBP13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 CCDC102AQ96A19 550 aa13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 RBM19Q9Y4C8 960 aaKnown RBP13.21□□□□□ -0.29
SAMD4B-205ENST00000596319 FAM155AB1AL88 458 aaPredicted RBP13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 TTLL5Q6EMB2 1281 aa13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
SAMD4B-205ENST00000596319 E9PSI1 815 aa13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 GRM8O00222 908 aa13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 KLRK1P26718 216 aa13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 ZNF157P51786 506 aaPredicted RBP13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 FKBP1BP68106 108 aa13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
SAMD4B-205ENST00000596319 IRS2Q9Y4H2 1338 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 WNT10BO00744 389 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 KCNJ4P48050 445 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 LMBR1LQ6UX01 489 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
SAMD4B-205ENST00000596319 SLC10A3P09131 477 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 GTF2IP78347 998 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 ABHD8Q96I13 439 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 HDAC9Q9UKV0 1011 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 CASP8AP2Q9UKL3 1982 aa13.17□□□□□ -0.3
SAMD4B-205ENST00000596319 SNAP23O00161 211 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 TAF5LO75529 589 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 HELBQ8NG08 1087 aaPredicted RBP13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 SAGE1Q9NXZ1 904 aa13.16□□□□□ -0.3
SAMD4B-205ENST00000596319 IL1R1P14778 569 aa13.15□□□□□ -0.3
SAMD4B-205ENST00000596319 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms