RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CRBNQ96SW2 442 aa17.81■□□□□ 0.44
LIG1-208ENST00000595758 COA1Q9GZY4 146 aa17.81■□□□□ 0.44
LIG1-208ENST00000595758 GJA3Q9Y6H8 435 aa17.81■□□□□ 0.44
LIG1-208ENST00000595758 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
LIG1-208ENST00000595758 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
LIG1-208ENST00000595758 TNIP1Q15025 636 aa17.8■□□□□ 0.44
LIG1-208ENST00000595758 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
LIG1-208ENST00000595758 CIAPIN1Q6FI81 312 aa17.8■□□□□ 0.44
LIG1-208ENST00000595758 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
LIG1-208ENST00000595758 HMMRO75330 724 aa17.79■□□□□ 0.44
LIG1-208ENST00000595758 ZNF804AQ7Z570 1209 aa17.79■□□□□ 0.44
LIG1-208ENST00000595758 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
LIG1-208ENST00000595758 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
LIG1-208ENST00000595758 KCNQ5Q9NR82 932 aa17.79■□□□□ 0.44
LIG1-208ENST00000595758 IFIT1P09914 478 aaKnown RBP17.78■□□□□ 0.44
LIG1-208ENST00000595758 FGFR2P21802 821 aa17.78■□□□□ 0.44
LIG1-208ENST00000595758 TFCP2Q12800 502 aa17.78■□□□□ 0.44
LIG1-208ENST00000595758 OS9Q13438 667 aaPredicted RBP17.78■□□□□ 0.44
LIG1-208ENST00000595758 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
LIG1-208ENST00000595758 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
LIG1-208ENST00000595758 A0A1B0GUL6 1792 aa17.78■□□□□ 0.44
LIG1-208ENST00000595758 PSMD14O00487 310 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 SLC5A1P13866 664 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 GYG1P46976 350 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 ATP2B3Q16720 1220 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 LPIN2Q92539 896 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 L3MBTL3Q96JM7 780 aaPredicted RBP17.77■□□□□ 0.44
LIG1-208ENST00000595758 FAM84BQ96KN1 310 aaPredicted RBP17.77■□□□□ 0.44
LIG1-208ENST00000595758 CD209Q9NNX6 404 aa17.77■□□□□ 0.44
LIG1-208ENST00000595758 VEGFAP15692 232 aaPredicted RBP17.76■□□□□ 0.43
LIG1-208ENST00000595758 HIBADHP31937 336 aaKnown RBP17.76■□□□□ 0.43
LIG1-208ENST00000595758 CAVIN4Q5BKX8 364 aa17.76■□□□□ 0.43
LIG1-208ENST00000595758 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
LIG1-208ENST00000595758 AKAP2Q9Y2D5 859 aa17.76■□□□□ 0.43
LIG1-208ENST00000595758 USP17L3A6NCW0 530 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 USP17L4A6NCW7 530 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 POTECB2RU33 542 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 SASH1O94885 1247 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 VIL1P09327 827 aaKnown RBP17.75■□□□□ 0.43
LIG1-208ENST00000595758 USP17L1Q7RTZ2 530 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 FBXO33Q7Z6M2 555 aa17.75■□□□□ 0.43
LIG1-208ENST00000595758 IQCA1LA6NCM1 817 aa17.74■□□□□ 0.43
LIG1-208ENST00000595758 IL1R1P14778 569 aa17.74■□□□□ 0.43
LIG1-208ENST00000595758 GMPSP49915 693 aaPredicted RBP17.74■□□□□ 0.43
LIG1-208ENST00000595758 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
LIG1-208ENST00000595758 FBXW7Q969H0 707 aa17.74■□□□□ 0.43
LIG1-208ENST00000595758 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
LIG1-208ENST00000595758 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
LIG1-208ENST00000595758 BCAMP50895 628 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 TIMM10P62072 90 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 AAMPQ13685 434 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 STRIP1Q5VSL9 837 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 TTLL5Q6EMB2 1281 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 HACL1Q9UJ83 578 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
LIG1-208ENST00000595758 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
LIG1-208ENST00000595758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
LIG1-208ENST00000595758 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 SCN9AQ15858 1988 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 A0A1B0GUL7 405 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 KIF3CO14782 793 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
LIG1-208ENST00000595758 SCNN1DP51172 638 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 GTF2IP78347 998 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
LIG1-208ENST00000595758 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
LIG1-208ENST00000595758 NEUROD6Q96NK8 337 aa17.72■□□□□ 0.43
LIG1-208ENST00000595758 ADORA1P30542 326 aa17.71■□□□□ 0.43
LIG1-208ENST00000595758 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
LIG1-208ENST00000595758 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
LIG1-208ENST00000595758 DPF2Q92785 391 aa17.71■□□□□ 0.43
LIG1-208ENST00000595758 TAF1DQ9H5J8 278 aaPredicted RBP17.71■□□□□ 0.43
LIG1-208ENST00000595758 GPR108Q9NPR9 543 aa17.71■□□□□ 0.43
LIG1-208ENST00000595758 GPRC5DQ9NZD1 345 aa17.71■□□□□ 0.43
LIG1-208ENST00000595758 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
LIG1-208ENST00000595758 EPHX2P34913 555 aa17.7■□□□□ 0.42
LIG1-208ENST00000595758 EPS15P42566 896 aa17.7■□□□□ 0.42
LIG1-208ENST00000595758 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
LIG1-208ENST00000595758 XAGE2Q96GT9 111 aa17.7■□□□□ 0.42
LIG1-208ENST00000595758 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
LIG1-208ENST00000595758 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
LIG1-208ENST00000595758 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
LIG1-208ENST00000595758 APBB1O00213 710 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
LIG1-208ENST00000595758 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 GMLQ99445 158 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 MXD3Q9BW11 206 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 JAG2Q9Y219 1238 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 FAM205AQ6ZU69 1335 aa17.69■□□□□ 0.42
LIG1-208ENST00000595758 H7C1D1 291 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 ZNF609O15014 1411 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 PHKA1P46020 1223 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 MYO3BQ8WXR4 1341 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms