RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 DBF4Q9UBU7 674 aaPredicted RBP11.06□□□□□ -0.64
SMG9-202ENST00000594081 OTOFQ9HC10 1997 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 SSC5DA1L4H1 1573 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 MYO3BQ8WXR4 1341 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 KIAA0100Q14667 2235 aaKnown RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 HOXB7P09629 217 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 ATP2B4P23634 1241 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 CENPFP49454 3210 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 DACT2Q5SW24 774 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
SMG9-202ENST00000594081 CCDC85AQ96PX6 553 aaPredicted RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 ANGEL1Q9UNK9 670 aaKnown RBP11.05□□□□□ -0.64
SMG9-202ENST00000594081 MANSC4A6NHS7 340 aaPredicted RBP11.04□□□□□ -0.64
SMG9-202ENST00000594081 IGF2BP3O00425 579 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMG9-202ENST00000594081 CHL1O00533 1208 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
SMG9-202ENST00000594081 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
SMG9-202ENST00000594081 ANKRD18AQ8IVF6 992 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 FZD1Q9UP38 647 aa11.04□□□□□ -0.64
SMG9-202ENST00000594081 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
SMG9-202ENST00000594081 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
SMG9-202ENST00000594081 PDE8AO60658 829 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
SMG9-202ENST00000594081 EN2P19622 333 aaPredicted RBP11.03□□□□□ -0.64
SMG9-202ENST00000594081 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 RIC3Q7Z5B4 369 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 CD99L2Q8TCZ2 262 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 ARMC5Q96C12 935 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 PTPN22Q9Y2R2 807 aa11.03□□□□□ -0.64
SMG9-202ENST00000594081 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
SMG9-202ENST00000594081 STRIP1Q5VSL9 837 aa11.02□□□□□ -0.65
SMG9-202ENST00000594081 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
SMG9-202ENST00000594081 MYD88Q99836 296 aa11.02□□□□□ -0.65
SMG9-202ENST00000594081 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
SMG9-202ENST00000594081 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
SMG9-202ENST00000594081 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 CTSWP56202 376 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 INHBEP58166 350 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 CRHR2Q13324 411 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 MAP3K11Q16584 847 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 KIAA0825Q8IV33 1275 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 CCDC191Q8NCU4 936 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 JARID2Q92833 1246 aaPredicted RBP11.01□□□□□ -0.65
SMG9-202ENST00000594081 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 CDC5LQ99459 802 aaKnown RBP11.01□□□□□ -0.65
SMG9-202ENST00000594081 COA1Q9GZY4 146 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
SMG9-202ENST00000594081 CCT4P50991 539 aaKnown RBP11□□□□□ -0.65
SMG9-202ENST00000594081 CAP1Q01518 475 aa11□□□□□ -0.65
SMG9-202ENST00000594081 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
SMG9-202ENST00000594081 ZBED3Q96IU2 234 aaPredicted RBP11□□□□□ -0.65
SMG9-202ENST00000594081 PHAXQ9H814 394 aaKnown RBP11□□□□□ -0.65
SMG9-202ENST00000594081 EFCC1Q9HA90 598 aa11□□□□□ -0.65
SMG9-202ENST00000594081 CWC25Q9NXE8 425 aaPredicted RBP11□□□□□ -0.65
SMG9-202ENST00000594081 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
SMG9-202ENST00000594081 CEP290O15078 2479 aa11□□□□□ -0.65
SMG9-202ENST00000594081 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
SMG9-202ENST00000594081 KLRK1P26718 216 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 MMP14P50281 582 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 TXNRD3Q86VQ6 643 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 CCDC146Q8IYE0 955 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 TMEM106CQ9BVX2 250 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
SMG9-202ENST00000594081 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
SMG9-202ENST00000594081 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
SMG9-202ENST00000594081 GJA5P36382 358 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 SP3Q02447 781 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 OTUD7BQ6GQQ9 843 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 GREM2Q9H772 168 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
SMG9-202ENST00000594081 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 GTF2IP78347 998 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 DLGAP5Q15398 846 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 SLC9C1Q4G0N8 1177 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 TTLL11Q8NHH1 800 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 METTL22Q9BUU2 404 aaPredicted RBP10.97□□□□□ -0.65
SMG9-202ENST00000594081 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
SMG9-202ENST00000594081 PTCH2Q9Y6C5 1203 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 ZNF804BA4D1E1 1349 aa10.97□□□□□ -0.65
SMG9-202ENST00000594081 CLRN2A0PK11 232 aa10.96□□□□□ -0.65
SMG9-202ENST00000594081 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
SMG9-202ENST00000594081 H0YGN5 161 aa10.96□□□□□ -0.65
SMG9-202ENST00000594081 PTPN18Q99952 460 aa10.96□□□□□ -0.65
SMG9-202ENST00000594081 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms