RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MYOZ2Q9NPC6 264 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 CA12O43570 354 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 CCT4P50991 539 aaKnown RBP13.7□□□□□ -0.22
USE1-203ENST00000593597 KIF23Q02241 960 aaPredicted RBP13.7□□□□□ -0.22
USE1-203ENST00000593597 GCKRQ14397 625 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
USE1-203ENST00000593597 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
USE1-203ENST00000593597 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
USE1-203ENST00000593597 SNAP23O00161 211 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 CSF1RP07333 972 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 USP17L8P0C7I0 530 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 PRAMEF18Q5VWM3 479 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 PODNQ7Z5L7 613 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 RASAL3Q86YV0 1011 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 SULF1Q8IWU6 871 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 ARAP2Q8WZ64 1704 aa13.69□□□□□ -0.22
USE1-203ENST00000593597 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 CCDC85CA6NKD9 419 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 G3V3G9 751 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 VAMP4O75379 141 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 ITGA6P23229 1130 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
USE1-203ENST00000593597 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
USE1-203ENST00000593597 OTOFQ9HC10 1997 aa13.67□□□□□ -0.22
USE1-203ENST00000593597 RGS19P49795 217 aa13.67□□□□□ -0.22
USE1-203ENST00000593597 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
USE1-203ENST00000593597 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
USE1-203ENST00000593597 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
USE1-203ENST00000593597 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 ZNF804BA4D1E1 1349 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 F6X3S4 739 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 WNT10BO00744 389 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 SASH1O94885 1247 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 FOXO4P98177 505 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
USE1-203ENST00000593597 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
USE1-203ENST00000593597 DGKZQ13574 1117 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
USE1-203ENST00000593597 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
USE1-203ENST00000593597 HTTP42858 3142 aa13.66□□□□□ -0.22
USE1-203ENST00000593597 AOX1Q06278 1338 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 TRPA1O75762 1119 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 CHRNDQ07001 517 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 CERS5Q8N5B7 392 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 PCDHAC2Q9Y5I4 1007 aa13.65□□□□□ -0.22
USE1-203ENST00000593597 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
USE1-203ENST00000593597 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
USE1-203ENST00000593597 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
USE1-203ENST00000593597 TAF5LO75529 589 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 FKBP1BP68106 108 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 KIAA0825Q8IV33 1275 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
USE1-203ENST00000593597 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
USE1-203ENST00000593597 GTF2IP78347 998 aa13.62□□□□□ -0.23
USE1-203ENST00000593597 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
USE1-203ENST00000593597 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
USE1-203ENST00000593597 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
USE1-203ENST00000593597 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
USE1-203ENST00000593597 C15orf52Q6ZUT6 534 aaKnown RBP13.61□□□□□ -0.23
USE1-203ENST00000593597 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
USE1-203ENST00000593597 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
USE1-203ENST00000593597 MPHOSPH8Q99549 860 aa13.61□□□□□ -0.23
USE1-203ENST00000593597 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
USE1-203ENST00000593597 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
USE1-203ENST00000593597 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
USE1-203ENST00000593597 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
USE1-203ENST00000593597 IL1R1P14778 569 aa13.59□□□□□ -0.23
USE1-203ENST00000593597 MLLT1Q03111 559 aaPredicted RBP13.59□□□□□ -0.23
USE1-203ENST00000593597 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
USE1-203ENST00000593597 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
USE1-203ENST00000593597 LMBR1LQ6UX01 489 aa13.59□□□□□ -0.23
USE1-203ENST00000593597 R3HDMLQ9H3Y0 253 aa13.59□□□□□ -0.23
USE1-203ENST00000593597 JAG2Q9Y219 1238 aa13.59□□□□□ -0.23
USE1-203ENST00000593597 TBC1D8O95759 1140 aa13.58□□□□□ -0.24
USE1-203ENST00000593597 PRKG1Q13976 671 aa13.58□□□□□ -0.24
USE1-203ENST00000593597 LDLRAD1Q5T700 205 aa13.58□□□□□ -0.24
USE1-203ENST00000593597 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
USE1-203ENST00000593597 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
USE1-203ENST00000593597 CENPFP49454 3210 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms